Pistacia vera (pistachio): 116121233
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Entry
116121233 CDS
T07386
Name
(RefSeq) nijmegen breakage syndrome 1 protein
KO
K10867
nibrin
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116121233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvy03032
]
116121233
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116121233
DNA replication proteins [BR:
pvy03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
116121233
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
116121233
BRCA1-C complex
116121233
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FHA
BRCT
Nbs1_C
Motif
Other DBs
NCBI-GeneID:
116121233
NCBI-ProteinID:
XP_031263040
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MVWGVFPVDPLSGEDKYYIFSRGSYKVGRKGCDVIINKDKGVSRIHAEIFVDEMISLYPL
QRSSSNINSNVRIRDCSKYGTFINKNGGSKEKLHEFPDKETTLKDGDLISFGTGSATYRF
SYVPLQLFVYCSELIQVNASIQEKVSSIGAYLTSNFCLECTHVLVHNQMPLTKDLIDAIL
AKKPLVTDGWLESVAEKSICTEFPSCNFSIMTLMVEGVPFELANSETRKNCLEAYTFLLE
SIDEYKYGYRLQSLLELGGAKTLSIERFCSGSQDLEYGDLNCVVFIIPRRSKDDSNCFNK
LSSLPRVDEMDLICAVLSGRLDPSILKTPSVLISSSCSTDETVVADSDVEAQTSSLVNAT
SAATTEEAPKYLRKDEIFVNYANNSMTGSREKANEANVVALTEEAPKYLTKEEISINHAN
SSVAESREKVDEADTQVLAKEPPKYLRKEEISINHANNSMTRCREKADESECEHSVVIYS
QDLVVRDLNLSATFSSTATNGVINFKCFRKINTQSGNSFSSLIPFSKYPYKDMDFGTAEM
VESVKEEKKRKQAEAIAEDLFNNEKGRKRGVAGSLHGLLTR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggggtgtctttccagttgatcctctctcaggcgaagataaatactacatattc
agcagggggagttacaaagtgggtcgcaaaggatgtgatgtaattatcaataaagacaaa
ggagtttctcgaatccatgcggagatatttgttgatgaaatgatttccttatatcccctg
caaagaagttcttctaacataaactccaatgttcggattcgagattgctctaagtatgga
acatttattaacaagaatggtgggtcgaaggaaaaacttcatgaatttccggataaagaa
acaactctcaaagatggtgacttaatttcatttggaactggtagtgcaacctacaggttt
tcttatgttccgctccaactttttgtctactgctctgaacttatccaagtaaatgcttcc
attcaagaaaaagtttcatcaataggtgcttatcttaccagtaatttctgtctggagtgc
acacatgttcttgttcataatcagatgcctttaacaaaagatctcattgatgctattttg
gctaaaaaacctcttgttactgatggttggcttgagtctgttgcagagaaaagcatttgc
actgaatttcctagctgcaatttttctattatgacattgatggtagagggagtgccattt
gaacttgcaaactcagaaactcgtaagaactgtttggaagcatatacttttctgttggaa
tcgatagacgagtataaatatgggtatcgattgcagtcactgttggaattgggcggcgca
aagactctctccattgaaagattttgttcaggcagccaagacttggagtatggagacctt
aattgtgtggtatttatcatcccaagaagatccaaagatgattctaattgcttcaataag
ctcagttcactacctagagtggatgaaatggatttgatatgtgctgttttatctggacgt
ctggatccatctattttgaaaacaccatctgtgcttatttcatcttcatgctccacggac
gagacagtggttgcggactctgatgttgaagcacagacatcttcattggttaatgcaaca
tctgctgccacgactgaggaagcccccaaatatctgagaaaagatgaaatatttgtcaat
tatgcaaacaatagtatgacaggaagcagagagaaggctaacgaggctaatgttgtagcc
cttactgaggaagcccccaaatatctgacaaaagaggaaatatctatcaatcatgcaaac
agtagtgtggcagaaagcagagagaaggtggacgaggctgatactcaagtccttgctaaa
gaaccccccaaatatctgagaaaagaggaaatatcaatcaatcatgcaaacaatagtatg
acacgatgcagagagaaagctgatgagtcagaatgtgaacattcagttgttatttacagc
caagatttagttgtccgagatttgaatttaagtgcaacttttagctctacagcaactaat
ggagtcataaatttcaaatgcttcagaaagataaatactcagtcggggaatagcttcagc
agtcttattccattttcaaaatacccatataaagatatggactttggtactgcagaaatg
gtcgagtctgttaaagaagagaaaaagagaaagcaagcagaagctattgcagaagactta
tttaacaatgaaaaggggagaaaacgtggagtagctggttcccttcatggacttcttact
cgatga
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