Pistacia vera (pistachio): 116121329
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Entry
116121329 CDS
T07386
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116121329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvy03041
]
116121329
Spliceosome [BR:
pvy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116121329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
DUF4200
Motif
Other DBs
NCBI-GeneID:
116121329
NCBI-ProteinID:
XP_031263146
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MATLADSFLADLDELSDNEADIIEEDEVDASNMEEDIDGDMADIEALNYDDLDNVSKLQK
TQRYTDIMQKVEDALQKGSDTSDHGLVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEEVLQKTIDACNRALTLDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
SALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQTTPPSLRMRACRLLAAK
STLAARVDSTRGDPSGTAGRAFREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAVTDMRKLANRMLFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAA
KVAKKFKEKNYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFS
KIKRN
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcgactttggctgattctttcctagctgacctggatgagttatctgacaatgaagct
gatattattgaggaggatgaggtcgatgcctcaaacatggaagaggacatcgatggtgac
atggcagatatagaagcgcttaactatgatgacctggacaatgtttcaaaattgcagaaa
actcagagatatactgatataatgcagaaagttgaagatgcacttcagaagggttctgat
acatcagatcatggattggtattagaagatgatccagaataccagctgatagtagattgc
aatgcattatcggtcgatattgagaatgaaattgttatcatccacaatttcattcgtgac
aagtatcgcttgaaatttccagagctcgaatctcttgtgcatcacccaattgattatgcc
cgtgttgtgaaaaagattggcaatgagatggatttaacccttgttgatctggaggggctt
ttaccctcagctattattatggtggtttcagttacagcgtcaaccactagtggtaagcca
ctcccagaagaggtcctccaaaagacaattgatgcatgcaatcgagctcttactcttgat
tcagcgaagaagaaggtccttgattttgtagaaagtagaatgggatatattgcgccaaat
ctatctgcaattgttggaagtgcggttgcagcaaaacttatgggaactgcaggcggtctc
tcagcattagctaagatgcctgcttgtaatgttcagcttcttggtgccaagaaaaagaat
cttgcaggattttctactgcaacatcacaattccgtgttggttatcttgagcagacagag
atttttcaaaccacccccccttctttgaggatgcgtgcatgtcggctcttggctgcaaaa
tcaacccttgctgcacgtgtagattctactagaggagatccttctggaactgctggaaga
gcatttagggaagagattcgcaagaagattgaaaaatggcaagagcctcctccggcaaag
caacctaaaccacttccagttccagattcagaacccaaaaagaagagaggtggtcgtcgg
ttaaggaagatgaaggaaagatatgcagtaacagatatgaggaagctggctaacaggatg
ttatttggtgtgcctgaagagagttccttaggtgatgggctgggggagggttatggaatg
cttgggcaggctgggagtggcaaactccgtgtttcagttgggcagagcaaacttgctgca
aaagttgcaaagaagtttaaggaaaagaattatggaagcagtggtgctacttctggactg
acatcaagtctggcatttactcctgtgcaggggattgagcttacaaatccgcaggctcat
gcacaccaacttggcagtggaactcaaagtacgtacttctcagagacgggaacattttca
aaaatcaagcggaactaa
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