Pistacia vera (pistachio): 116121490
Help
Entry
116121490 CDS
T07386
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
116121490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116121490
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
116121490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
116121490
NCBI-ProteinID:
XP_031263302
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MEEEGGKVRALIDKATNSTAREVDPRLLKAIKSVVRYSDSELRLAAQTLMDLMKRDHSQV
RYLTLLIIDELFMRSKLFRALVAENMDQLLSLSVGFRRNLSLPAPPAIASILRSKAIEFL
EKWNASFGVHYRQIRLGYDYLKNTLRFQFPNLQANATRIQQERREREMRTKEILRNKFGM
LRQNFSSIKKEIQSTVDEIGECLDILCAKEENMLLASLDDEDLEEFHSSELRQIRFDSLK
EGEKVHENNDNKVVFDALRELYKLLVSKHLVSVQEWISVLIRVEVPDSRFRDSTLKEFID
IRNRLLSVKKKCEESGCTLANNVKPLKEEEEEDFWEEGKIGSTEDRKTSTPNENNINLAM
ASTSGEVRNEDPKSSNEKYEGNGTLDHESGKADSTSLRSKLLTEAPMIEWGSYLNYWGLD
REVLANQRGLEIDNHWGRVDFDAVIPAEKIAELNLRASRYKEEPVEIQPCRAPLKKGGLC
QRRDLEVCPFHGPIIPRDDEGNPINQSSSIDEELTKTNQISSMDTLTKTNSSIDEMTSDF
GSDLTEQLAKQAVKNIRDRDKEKARKRKIDKQLLSRAKLAKVREHNEAVLRDAALASTSR
SAAIGEEMEVGKGKKPLARNKKPTLASMLRNKQTAKDRLAQRLLNTRTRDSTIRQLTMGE
DANYREAFPNQW
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggagggaggtaaggttagggcgttgatagataaggctacaaactcaacagca
cgggaggtagacccacgtctcctcaaagccatcaaatctgtggttcggtattcagattcc
gagctccgactcgccgcccaaacgctcatggacctcatgaaacgcgaccactctcaggtt
cgatatctcacacttctgataattgatgagcttttcatgcgatcgaagctctttagggcg
cttgttgctgagaacatggatcaattattgagtttaagtgttggattcagaagaaatctg
tcactccctgctcctcccgctattgcatccattttgcgttcaaaggccattgaatttttg
gaaaaatggaatgcttcttttggggttcattatagacagattagattgggctatgactac
cttaaaaacactttgaggtttcagtttcctaatttgcaagcaaatgcaactcggattcag
caggagagaagggaaagggagatgaggacaaaagaaattttacgcaataagtttggtatg
ctgcggcaaaatttttcttcaataaagaaagaaatacagtcaaccgtagatgagattgga
gagtgtttagacattctctgtgctaaagaggaaaatatgttacttgcttccttagatgat
gaagatttggaggagttccattcttctgaactgaggcagattcgttttgattcattgaaa
gaaggggaaaaggtgcatgagaataacgacaataaagtagtttttgatgcattgagggag
ttgtacaagcttttagtgtccaagcatctggtttccgttcaagaatggatttctgttctt
ataagggtggaagtgccagacagtaggtttagagattcaacactaaaggaattcattgat
atacgaaatcgtctactatcagtaaagaagaaatgtgaagaatcaggttgtactcttgca
aacaatgtgaaaccgctcaaagaggaggaagaagaagacttttgggaagagggtaagatt
ggatcaacagaggataggaaaactagcacacccaatgaaaacaatattaatcttgccatg
gcatcaacctctggcgaggtcagaaacgaggatcccaaaagcagtaatgaaaaatatgaa
gggaatggcacactggatcatgaaagcggtaaagctgattcaacatcacttaggagtaag
cttttaactgaagccccaatgatcgagtggggatcatatttgaattattggggtttggac
agggaagtcttggctaaccagaggggcttggagattgacaatcactggggtagagtagac
tttgatgcagttattccagctgagaagatagcagaactgaaccttcgggcatctcgttac
aaagaagaaccggtagaaattcaaccatgccgtgctcctttgaagaaaggcggcctttgt
cagagaagagatttggaagtttgtccgtttcatggacccataataccccgagatgatgaa
ggaaatccaatcaatcagagctcttcaatagatgaggaacttactaagacgaatcagatc
tcttcaatggatacactaactaagacgaactcatcaatagacgagatgacttctgatttt
gggtctgatttaacagagcaattagcaaaacaagctgtaaagaatatccgggatagagat
aaagagaaagcaaggaagagaaaaattgataaacaattgctgagtcgtgcaaaacttgct
aaagtacgggaacacaatgaagcagttttacgggatgctgcattggcttcaacttcgaga
tctgcagctataggagaagaaatggaggttggcaaggggaagaaaccactggccagaaat
aagaagccaactcttgcatccatgttgcggaataaacaaacggcaaaagataggctagct
cagagacttttgaatacccgaacaagggattcaacaataagacagctgacgatgggggag
gatgcaaattaccgagaagcctttccaaatcagtggtaa
DBGET
integrated database retrieval system
