Pistacia vera (pistachio): 116121557
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Entry
116121557 CDS
T07386
Name
(RefSeq) cell differentiation protein rcd1-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116121557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116121557
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116121557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
116121557
NCBI-ProteinID:
XP_031263372
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MANLPESIWGDSLSVAGASTSTAVDAEKLASLEQWIKALQSHETRERALIVLSKMRENRE
HLAPLFGFIWYNCSAVTGRVATFIVHKILSNDEGLRYCCTFAERFFAVAHSLREMVEKVA
EEPSQRLLKLIISCFFRLSENPRACDGLRCCLPRSLKDNTYFGLLQMRENRGHLAPLLWD
SFGTIALLLQEIISVYVLLSSSALTERTSSRASHALALFQCVASHPDTRKKFLNAQVPLY
LYPFLNNRNKEKSHEYLRLASLGVIGALVKSNDPEAINFLLETRIFPCCLVCMEVGTELS
KTVATFIVHKILSNDEGLRYCCTFAERFFAVAHLLREMVEKVAEEPSQRLLKLIISCFFR
LSENPRACDGLRCCLPRSLKDNTFFGLLQVCSLITFLLPVSYFEIS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggccaacttaccagaatcgatatggggagactcattgtcagtagcgggtgcaagcacg
tctactgccgttgatgccgaaaaattggcgtcgttggagcagtggattaaggctctccaa
tcccatgaaacccgagaacgtgctctcattgtcctttctaagatgagagaaaatcgtgaa
catttggcgccattgtttggattcatttggtacaattgctctgctgttacaggtagggtt
gccacatttattgttcataaaatcttatcaaatgatgagggtttgaggtattgctgtact
tttgctgaacggtttttcgcagtggctcatagtttgagagagatggttgaaaaagttgct
gaagaaccctcccaacggctgctaaagcttattattagttgtttttttagactctcagaa
aatccgagggcatgcgatggactaagatgctgtcttcctaggagtttaaaagacaacacc
tattttggcctactacaaatgagagaaaatcgtggacatttggcgccattgttatgggat
tcatttggtacaattgctctgctgttacaggaaataatatcagtatacgtcttgctatct
tcttcagctcttacagaaagaacatcaagcagggcatctcatgctcttgctctatttcag
tgtgtagcatcccaccctgatacaaggaagaagtttctcaacgctcaagtgccgctgtat
ctgtacccctttctgaacaataggaacaaagaaaagtcccatgaatatctaaggcttgcc
agcttaggtgtgattggtgccctggtgaagtcaaatgatccagaagctattaatttcctt
ctggagactcgaatatttccttgttgcctggtctgcatggaggtgggcactgaattatca
aaaaccgttgccacatttattgttcataaaatcttatcaaatgatgagggtttgaggtat
tgctgtacttttgctgaacggtttttcgcagtggctcatcttttgagagagatggttgaa
aaagtagctgaagaaccctcccaacggctgctaaagcttattattagttgtttttttaga
ctctcagaaaatccgagggcatgcgatggactaagatgctgtcttcctaggagtttaaaa
gacaatactttttttggcctactacaagtatgctctttgataacctttcttcttcctgtt
agctactttgaaatttcttag
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