Pistacia vera (pistachio): 116121698
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Entry
116121698 CDS
T07386
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116121698
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvy01002
]
116121698
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvy04121
]
116121698
03036 Chromosome and associated proteins [BR:
pvy03036
]
116121698
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116121698
Peptidases and inhibitors [BR:
pvy01002
]
Metallo peptidases
Family M67
116121698
Ubiquitin system [BR:
pvy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
116121698
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
116121698
BRISC complex
116121698
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
116121698
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
116121698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
116121698
NCBI-ProteinID:
XP_031263494
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MSLTAVKMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKNGNVTALIWGASPQSRSDRR
KDRVETNPEQLAAASAQADRMTMLTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFIGLIFSCFSEDINKIGRIQVIAFQSSDGKQNLISRPISLSPVNKNVVIDLDSSLSSS
ENLLLRSGSARAESPEQDTGDSSTATGSWKGVGRSSDLGGFFANADANHLERERVGGNYQ
TGDLSNTIADLDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLKLDSPLTS
FTDLQHVLYQEERAAYNQAILQNMRDGKVHPLTYIHHTSTYQASMCKLIEYCLSPAINAL
QDQLSENEIRLAMLTDEAKMLETDASKGGESSSSPRHPPSHGLRGSALVGHRDLHSSANL
RTVSSPGSRSRKGGS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaacagcagttaaaatgtccgaggatgtttggttaacttgtcttactcacgca
ttgtccactgaaactgaagagatcatgggtcttcttcttggtgacatcgagtactcaaaa
aatggtaatgtcactgcactaatttggggagcgtcacctcagtcacgatctgatcggcga
aaggatcgagtagagacaaatcctgaacagttggctgctgcctcagctcaggccgataga
atgaccatgttgactggaagaacaacaagagtcattgggtggtaccattcacatccgcat
attacagttcttccttctcatgttgatgtgcggactcaagcaatgtatcaacttctagat
tctggatttattgggctgatattttcttgttttagtgaagatataaacaagattggaaga
atccaagttattgcatttcagtcctcggatgggaagcagaatctcatatcaagaccaatt
tctttatcacccgttaataaaaatgtagttattgatttggattcatctttaagttcctct
gaaaatctattactgagatctggaagtgcaagggcagagagccctgaacaagacaccggt
gattccagcacagcaacaggatcttggaagggtgtgggaagatcttcagacttgggtggt
ttctttgcaaatgctgatgccaaccatcttgagagagagagagttggaggaaactaccaa
actggtgatttaagtaacaccattgcggatttagatcccatggatatgtcagaaagtatg
caagaggccatgcaccgttcaaatttggacatgagtggtgcggagtatgtcaggaaagaa
atccctcttcatgttttgccgacctcatctcttctgaaacttgattcgcctctaacatct
tttacggatttgcaacatgtactatatcaagaggaacgggcagcatataaccaagctata
ttgcaaaatatgagggatggaaaagtgcatccccttacttacattcatcacacatctaca
tatcaggcttcaatgtgcaaattaattgaatattgtttaagtcctgccataaatgcacta
caagatcaattgagcgagaatgaaattcggttggcaatgctgacggatgaagcaaagatg
ttagagactgatgcctctaaggggggtgagtctagttcatctccccgtcatcctccatct
catggtctcaggggaagtgctttggttggtcacagggacttgcatagctcagctaatttg
aggaccgtatctagtcctggtagccgcagcagaaaagggggttcctag
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