KEGG   Pistacia vera (pistachio): 116121759
Entry
116121759         CDS       T07386                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116121759
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvy03019]
    116121759
   03041 Spliceosome [BR:pvy03041]
    116121759
Messenger RNA biogenesis [BR:pvy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     116121759
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     116121759
Spliceosome [BR:pvy03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    116121759
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM_2 RRM_PARP14_3 FANCI_S1-cap
Other DBs
NCBI-GeneID: 116121759
NCBI-ProteinID: XP_031263563
LinkDB
Position
Unknown
AA seq 425 aa
MTRTTKAKKLKPSITATRKPTKKILKKEPKSVQKPEKSKPETRISDSDSEADTDKLTALL
EPYSKDQLINLISAAAVTNSALFDHLRAAADRDVTHRKLFVHGLGWDTTPETLKSAFENF
GEIEDLKLVTDKVTGKAKGFAFIVFKTRKSTEKALQNPQKKINNRIVSWQLASVGPTAPP
AAVAKEGKDQSIINNNNNSNGVGEKKIYVSNVQRDVDKETLKVFFERFGEIETGPFGFDV
NTGKSRGFAIFVYKTVEGARKALEEPVKVFQGHQLHCQKAAEGKNKNHSKAHFSQQGQQT
VQGQQTVQGQQMVRGHHQGQGQGQIQDQSQMLAAMAAAQNLALFGQHPGLNPVYGGLFAN
PGLINPMVAGALNQGVVPSSHVPVGTVGGLGSYGTGQNLQHVYPNAQGRTQGTGGSFPGY
TPSYL
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgaccagaaccaccaaagccaagaaacttaaaccgtccatcaccgccactagaaaaccc
acaaaaaaaatccttaaaaaagagcccaaatctgtacaaaaaccggagaagagcaaaccc
gagacgagaatatcggactccgattccgaagccgataccgataagcttacagcgctccta
gagccctactcgaaagaccagctcataaaccttatttccgccgccgccgtcaccaactcc
gccctctttgatcaccttcgagccgcggccgaccgcgacgttacccaccggaaactcttc
gttcacggactcgggtgggacacgacgccggagacgctgaaatcggcgtttgaaaatttc
ggcgagatcgaagatttgaagctcgtgacggataaagtaaccggaaaggcgaaagggttc
gcctttatcgtatttaagacccgaaaatcgaccgagaaagcgctccaaaacccccagaaa
aagatcaacaaccgaattgtgtcgtggcagctggcttctgtgggccccacggctcccccc
gccgccgttgcgaaggagggaaaggaccaaagtattattaataataataataacagtaat
ggggttggggagaagaagatttatgtgagtaatgtacaaagggatgttgataaggagaca
ttgaaggtcttctttgaaagatttggagagattgaaacggggccctttgggttcgatgtg
aacactggcaagtcaagagggtttgccatttttgtgtataagactgtggagggggcgaga
aaggcattagaggaaccggtgaaggtgtttcaaggtcaccaattgcattgccagaaagca
gctgaagggaagaacaaaaatcatagtaaagcccatttctcgcaacaaggacagcaaacg
gtgcaagggcagcaaacggtgcaagggcagcaaatggtgcgagggcatcatcaggggcag
gggcaagggcaaatacaggatcaaagccagatgcttgctgccatggcagctgcacagaat
ttggcattgtttgggcagcatccaggattgaatccggtttatggaggattatttgcgaat
cctggattgattaatccaatggtggccggggcattgaatcaaggtgttgtgccttctagc
catgtgcctgtaggtacagtaggtggcttaggatcatatgggactggtcagaatttgcag
catgtttacccaaatgcacagggtagaactcaggggaccggtgggtcgtttcctggttat
acaccatcttacttgtga

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