Pistacia vera (pistachio): 116122003
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Entry
116122003 CDS
T07386
Name
(RefSeq) RAN GTPase-activating protein 1 isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116122003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116122003
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116122003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_4
LRR_At5g56370
DUF7761
LRR_NXF1-5
DUF7885
Motif
Other DBs
NCBI-GeneID:
116122003
NCBI-ProteinID:
XP_031263768
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MGYLTMDSASQTFQQRTLSVKLWPPSQSTRLMLVERMTKNLTTPSIFSRKYGLLGKEEAE
EDAKQIEELAFTAANQHYEKEPDGDGSSAVQVYAKESSKLMLEVIKRGPRAKEDGEVMIN
DKATAASQTIFDISGGRRAFIEEEEAEDVLGPLRDPGNSYTKIIFSNRSFGLGAARVAVP
ILNSIKDQLTEVDLSDFIAGRPESEALEVITMFSSALECCDLRYLNLSNNALGEKGVRAF
EALLKSQNNLEELYLMNDGISEEAARAVCELIPSTEKLKVLHFHNNMTGDEGAVAIAEMV
QHSPVLEDFRCSSTRIGSEGGVALAEALGTCTHLKKLDLRDNMFGVEAGLALSKALSAFP
DLTEIYLSYLNLDDEGAEALANALKESAPSLEVLELAGNDITAKGASSLAACIAAKQFLT
KLNLSENELKDEGAILIGKSLEEGHGQLTEVDLSTNSIRRAGARLLAQVAVNKLGYKMLN
INGNFISDEGIDEVKDIFKQSPDLLGPLDENDPEGEDFDEEAEDEDADNEDELESQLKGL
KIKQEE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgggatacttgaccatggattctgcatcacaaactttccaacaacgcacattatcagtc
aagctgtggccccctagtcagagtaccaggctaatgcttgttgagcgaatgacaaagaat
cttaccactccatccattttctcaagaaagtatggcctgctgggcaaagaagaggctgag
gaggatgccaagcaaatagaagagttagcttttacagctgcaaaccaacactatgagaag
gagccagatggtgatggaagttctgctgtgcaagtttatgccaaagaatccagtaagttg
atgctggaagttataaaaagaggccctagagcaaaggaggacggagaggtgatgataaat
gataaggctactgctgctagtcaaaccatctttgatatatctggaggtcgccgggcattt
atagaagaagaggaggctgaggacgtgctagggcccctaagggatccaggaaactcatat
accaagataattttcagcaacagaagttttggcttgggtgcagccagggttgcagtgccc
attttgaattcaattaaggatcaactgactgaagtagacctatcagattttattgctgga
aggccagagtcggaggcccttgaagtcattactatgttttcttctgccttggagtgttgt
gatttgaggtacctaaacctttcaaacaacgccttgggtgaaaagggtgttagggctttt
gaggctctcctcaaatcacagaataatctggaggagctttatttgatgaatgatggcatt
tcggaggaagctgcacgagcagtttgtgagctaattccttccactgagaagcttaaagtc
cttcattttcacaataacatgacaggagatgagggtgcagttgctatcgctgaaatggtg
caacattctcctgtgttggaggatttccgttgttcttcaacaagaattggctcagaggga
ggtgttgccctagctgaagcacttggaacatgtacccatctgaagaagcttgatcttcgt
gacaatatgttcggtgtggaagctggattagctctgagcaaagctttatctgcatttcct
gatcttactgagatttaccttagttatctgaacttggacgatgagggggcagaagcactt
gccaatgctctcaaggagtctgcaccctcacttgaagttctggaattggctggaaatgac
atcacagccaaaggtgcttcttctttagctgcttgtattgcagctaaacaattcctcact
aagttaaacttgtctgagaatgaactgaaagatgaaggtgctattttgattggcaagtca
ttggaagagggtcatggccagttaactgaagttgatttgagcacaaactcaatcagaaga
gctggggcaaggctcttggcacaggttgctgtcaacaaacttggttacaagatgctaaat
attaacggtaatttcatatctgatgaagggattgatgaggtgaaggatatatttaagcag
tcacctgatttgcttgggccactggatgagaatgatccggaaggagaagattttgatgag
gaggctgaagatgaggatgctgataatgaagatgaattggaatcacaacttaaggggctc
aaaatcaagcaagaggaatag
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