Pistacia vera (pistachio): 116122158
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Entry
116122158 CDS
T07386
Name
(RefSeq) homeobox-leucine zipper protein HDG11
KO
K09338
homeobox-leucine zipper protein
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvy03000
]
116122158
Transcription factors [BR:
pvy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
116122158
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
CDT1_C
DNA_gyraseB
Motif
Other DBs
NCBI-GeneID:
116122158
NCBI-ProteinID:
XP_031263926
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MEFGSGSGGDHDGSDPHRRKKRYHRHTAHQIQRLEAMFKECPHPDEKQRLQLSRELGLAP
RQIKFWFQNRRTQMKAQHERADNSALRAENDKIRCENIAIREALKNVICPSCGGPPVTED
SYFDEQKLRMENAQLKEELDRVSSIAAKYIGRPISQLPPVQPIHIASLDLTMGSFGGQGL
GGPSLDLDLLPGSSSTMPSLPYQQIVLSDMDKSLMTDIASNAMEELLRLLQTNEPLWIKS
STDGRDVLDLDSYERMFPRANGHLKNPNVRIESSRECGVVIMNGLALVDMFMDSNKWVEL
FPTIVSMSKTIEVISSGMLGGHSGSLQLMYEELQVLSPLVLTREFYILRYCQQIEQGLWA
IVNVSYDFPQFASQCRTHRFPSGCLIQDMPNGYSKVTWVEHVEIEDRTPIHRIYRDLIHS
GLAFGAKRWLATLQRMCERIACLLVSATSTRDLGGVIPSPEGKRSMMKLAQRMVNNFCTS
VSTSNSHRWTTLSGLNEIVVRVTLHKSTDPGQPNGVVLNAATSFWIPISPQNVFDFFKDE
RTRSQWDVLSNGNAVQEVAHIANGSHSGNCVSVLRALNTSQNNMLILQESCIDNSGALVV
YCPVELPAINVAMSGEDPSYIPLLPSGFTILPDGLLDQGGDGASTSSNVHANIGRSSGSL
ITVAFQILVSSLPSAKLNLESVNTVNNLIGTTVQQIKAALNCPSS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggagtttggaagtgggtctggtggagaccatgatggctcagaccctcatagaagaaaa
aagcgttatcatcgccatactgctcatcagattcagcggcttgaagcaatgttcaaggag
tgtccacacccggatgagaaacaaaggttacagttgagtagagaattgggtttggctcca
cggcagatcaagttttggtttcaaaataggagaacccagatgaaggcacaacatgaaaga
gcagataatagcgctttaagagcagaaaatgataagatccgatgtgaaaatatagccatc
agagaagctctcaagaatgtgatttgcccttcttgtggtggtcctcctgtgactgaagat
tcttattttgatgaacaaaagttgagaatggagaatgctcaattgaaagaagagcttgat
agagtttctagtattgctgcaaagtacattgggaggccaatctctcaattaccaccagtg
cagcccattcatatagcttcattggatttaacaatggggagttttggaggccaagggctt
ggtggtccttctcttgaccttgatcttcttcctggaagttcttccactatgccaagtttg
ccttatcaacagatagtgttatcagacatggataagtctctaatgacagatattgcctca
aatgcaatggaagaattgcttcgccttttgcagacaaacgagcccttgtggattaagtca
tcaacagatggtagagatgttcttgatcttgatagttatgagagaatgtttccaagggct
aatggccacttgaaaaatcccaatgttagaattgagtcttccagagaatgtggggttgtg
attatgaatggcttagcattggttgacatgtttatggacagtaacaaatgggtggagttg
tttcctactattgtgtcgatgtcgaaaacaattgaagtaatatcatccggaatgttgggt
ggtcatagcggttctttgcaattgatgtacgaagagttgcaggtgctttcaccacttgta
ctaaccagagagttctacatcctccgttattgtcagcaaattgaacaaggcttgtgggca
atagtaaatgtttcttatgattttccccaatttgcttctcaatgtcgtactcatagattc
ccttctggatgcttgattcaggacatgcctaatggatactctaaggttacttgggttgaa
cacgttgaaattgaagacagaacacctattcataggatttatcgagatcttattcacagt
ggcctggcatttggagctaagcggtggcttgctactcttcaaagaatgtgtgagaggatt
gcttgtcttttggtttcagcgacttcaactcgggaccttggaggagttattccatcacct
gaaggaaaacgaagcatgatgaaacttgctcagagaatggttaacaatttctgtactagt
gttagcacatcgaatagccatcgttggaccactctttctgggttgaatgaaatagttgtg
cgagttacgctgcataagagcacagatcctggccaacctaatggtgtggttctaaatgca
gcaactagcttttggattccaatttctccccaaaatgtctttgattttttcaaagatgaa
agaactcggtctcagtgggatgttctctccaatggcaatgcagtacaagaagttgctcac
attgcaaatggatcacattctgggaactgcgtatcagttcttcgagccttaaatactagc
caaaacaacatgttaatactccaagagagctgcatagacaattcaggagcactagtagtt
tattgtcctgttgagttacctgccatcaacgtagcaatgagcggcgaggatccatcctac
attcccctactaccatcaggattcacgattttacctgatggtcttctggaccaaggtgga
gatggggcctcgacgagttcaaatgtccatgcaaatattggaagatcgagtggttcgctt
attacagttgcatttcagattctagtgagcagcctgccatctgctaaactaaatttggag
tcggtgaacacggttaataaccttatcggcacgactgtccagcaaattaaggctgctttg
aattgtcctagttcctga
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