Pistacia vera (pistachio): 116122159
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Entry
116122159 CDS
T07386
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03020
RNA polymerase
pvy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116122159
09124 Replication and repair
03420 Nucleotide excision repair
116122159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvy03021
]
116122159
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116122159
Transcription machinery [BR:
pvy03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
116122159
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
116122159
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
116122159
NCBI-ProteinID:
XP_031263927
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MESLSYQRFPKVKIRELEDDYAKLELRDTDASMANALRRVMIAEVPTIAIDLVEIDFNSS
VLNDEFIAHRLGLIPLTXDRAMTMRFSRDCDACDGDGQCEYCSVEFHLRVKCTGDQTLDV
TSKDLISSDHSVVPVDFADPAAYDSSDQQRGVIIVKLRRAQELRLRAIARKGIGKDHAKW
SPAATVTFMYEPEIHISEDLMETLTLAQKEAFVDSIPTKVFDLDHATGQVLVVDPEAYTY
DDEVLKLAEAMGKPGLIEIYGGEDIFIFTVEXTGAIKPSQMVLNAIEVLKQKLDAVRLSE
DTVEADDQFGELGAHMRGG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggagagcttatcgtaccagcgatttcccaaggtcaaaattcgcgagctggaagacgac
tacgccaagttggagctccgtgataccgacgcctcgatggccaatgcgcttcggcgcgtg
atgatcgcggaggttcccaccattgcaatcgacctcgtcgaaatcgacttcaactcttcc
gtcctcaacgacgagttcatcgcgcaccgtctcggtctcatcccgctcacangcgacaga
gccatgacaatgcgcttctcacgtgactgcgacgcctgtgacggagacggccaatgcgag
tattgctccgtggagttccatttgagagtcaagtgtacgggcgaccagactttggacgtc
accagcaaggatttgatcagctccgatcatagcgttgttcccgtcgacttcgccgatccc
gcggcctacgattcaagtgatcagcaaaggggtgttatcattgtaaagttacgtcgtgcg
caagaactgaggcttcgagcgatagctagaaaagggattggcaaagatcatgcaaaatgg
tctcctgctgcaactgtcactttcatgtacgaaccagagatccacatcagtgaagattta
atggaaactctgacgcttgcacagaaagaagcctttgttgatagtattccgacgaaagtg
tttgaccttgatcatgctactggacaggttctggtggttgatcctgaggcatacacttac
gatgatgaagtgcttaagctagcagaagccatggggaagccaggactcatagagatctat
ggcggagaagacatcttcatattcacagttgaatgaaccggtgcaattaaaccttctcag
atggtactcaatgccatagaagtactgaaacaaaagctggatgcagttcgcctgtctgag
gatacagtagaagctgatgatcagtttggtgaacttggagcacatatgcgaggaggatga
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integrated database retrieval system
