Pistacia vera (pistachio): 116122548
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Entry
116122548 CDS
T07386
Name
(RefSeq) uncharacterized protein LOC116122548 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvy04131
]
116122548
Membrane trafficking [BR:
pvy04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116122548
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
116122548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
ANAPC4_WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_THOC3
Beta-prop_VPS8
WD40_Prp19
WD40
PEP5_VPS11_N
Beta-prop_IFT140_1st
WDR55
Beta-prop_HPS5
Beta-prop_WDR5
Beta-prop_RIG_2nd
Synaptobrevin
Beta-prop_Aladin
CPSF_A
NBCH_WD40
Dor1
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
116122548
NCBI-ProteinID:
XP_031264244
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MINFFHKNSDQRPPPLQGSLTPKDLNPRVTLHYGIPCAASILAFDPVQSLLAVGTRDGTI
KVIGGYNVEGLLVSPKQLPFKNLEFLQNQGFLVSVSNENEIQVWDLEHRRITSKLQWESN
ITAFSVIYGTSYMYLGDEYGSVSVLKYNAEEGNLMQLPYYVPTNVIAEAAGISLSDHNSV
VGVLAQPYSQGKRLLIAYENGLVILWDVSEDRVVLVRGNKDLELKGKTVVNSSKSARHEP
SESESDHEQAEKEISSICWASTNGSVLAVGYVDGDIMFWNIPTAAPSKDQKTESSSNNVV
KLQLSSSNKRLPVIVLRWSADRSKNDCGGRLFVYGGDEIGSEEVLTMLYLDWSSGIESLK
CIDRVDITLNGSFADVVLLPSVGSVESCGTLPFVLTNPGQLHVYDDACLSSLISQQEKNT
SASPLQYPEVIPTIEPYMTVGKLGLVHRGGKFSRDLSKIVLAAKAQASDALLTPVTGSTK
WPLTGGVPCQFYAAEDYLVERLYVAGYQDGSVRIWDATYATMSLMYVLGSELPGIKTASA
GAPVSALDFCTDSLSLAVGYACGRVCLYKLVGSSNETSLNFATETGKEVHILPKGDGPQC
TAVFSFISSPVCNLQFSNTGAILAVGFECGRVAVLDISSSSVLFLTDSVSDSSSPVISLV
VKSFPNPNNTINTPKDSNLNTLENPIRNVVFFMTKDAHIVVCDSTTGNILASQSLHPKES
SAISMYILEDDGNLFSELSSAKHSVSSPRDSEPKNEPTQVNAKHGSIPLVAEPETSTETS
YSGQRLMDLFVLLCCENALWLYSLNSVIQGDSNCIRKVNLLKPCCWTATFKKDENEYGLV
IVYQTGEIEIRSLPCLEVVGETSLMSILRWNFKTNMEKTMCSSCNGQIVLINGYEFAFIS
VLASENDFRIPESLPCLHDKVLAAAANPTNISPSQKIVEGTVPAYLGGLVKGLKGLKEHN
VDLPGPEVSNQNCAHLDTIFSCPPFLKPSMDDQEVVELNIDDINFDEPLVVSSSSQKSNN
DEKDKRTNKENLFEGANTDAKPKPRTVEEIKAKYKKAGDASSAAAEARNKLAERQEKLEK
LRDRTEELQDGAQNFADMAGELAKAMEKRKWWKL
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgataaatttttttcataaaaactccgaccaacggccacctcctctacagggaagtttg
acaccgaaagacttgaatccacgcgtcactcttcattatggaataccatgtgctgcatct
attctagcttttgatcctgttcaaagtctattggcagtaggaacacgggacggtacaata
aaggtgattggcggctataatgttgaagggcttcttgtatctcctaagcagttacctttc
aaaaacttggagttcctacaaaatcaaggtttcctggtcagtgtctcaaatgaaaatgaa
atccaggtttgggatttggaacacaggcgaataacctccaaattacaatgggagtccaac
ataactgctttctctgttatttatggcaccagttacatgtatcttggagatgaatatggg
agtgtatctgtattgaagtataatgctgaagaaggaaatctcatgcaactgccttattat
gttcccacaaatgtcatagctgaggctgctggaatttcgttatctgatcataattctgtt
gttggagttctagcccaaccttattctcagggaaaaagattgctgattgcatatgagaat
ggcttggttattctttgggatgtttctgaagatagagttgttctagttagagggaacaaa
gatctcgaattgaagggtaaaacagttgttaattcttcaaaaagtgcaagacatgagcct
tctgaaagtgaatcagaccatgaacaagcagagaaagaaataagctccatctgttgggca
tctaccaatggatcagttcttgctgttggttatgtggatggagatataatgttttggaac
ataccaactgctgccccatctaaagatcagaaaactgaaagttcatctaataatgttgtt
aagctacagctatcatcaagcaacaaaagactccctgtcattgttttgcgttggtcggct
gacagatcaaagaatgattgtggtggccgactctttgtatatggtggtgatgaaattgga
tctgaagaagtcctgacgatgctataccttgattggtcttctggaatagaaagtttgaaa
tgcattgaccgtgtagacattacacttaatggttcttttgctgatgtggttttattacct
agtgttggttcagtggaaagctgtggcactttgccatttgtattgacaaacccaggacaa
ttgcatgtttatgatgatgcttgcttgtcttctttaatatctcagcaagagaaaaatact
tctgcttctccattgcagtatcctgaggtcatacccaccattgaaccatacatgactgtg
ggaaagcttgggttggtacatagaggtgggaaattttcgagggatctttctaagatagtc
ttggctgcaaaagctcaagcatccgatgcgctattgactcccgttactgggagtacgaag
tggcccttaaccggaggtgtcccctgccaattttatgctgctgaagattatctggttgag
agattatatgtagctggctaccaagatggatctgttcgaatatgggatgctacatatgct
actatgtcccttatgtatgttttaggatctgagctgccaggtattaaaactgctagtgct
ggtgcaccagtatcagcattggacttttgcacagactcgttaagtttagctgtcggctat
gcatgtggtagggtttgcttgtacaagctagtagggagttcaaatgaaacaagtttgaac
tttgcaacagaaactggaaaagaagtccacattttgcccaaaggggatgggcctcaatgc
acggctgttttttccttcatcagttctcctgtatgcaacctacaattttcgaatactgga
gccatacttgctgtaggatttgaatgtggccgggttgctgtacttgatattagttcatca
tcagtcttgtttcttacagacagtgtatccgactcaagttcccctgtcatatctttggtg
gtgaaatcatttcccaatcctaataacacaataaacactccaaaggactccaatttaaac
actttggaaaatcctataaggaatgtggtattctttatgaccaaggatgcacatattgtt
gtttgtgatagcaccacaggaaatattcttgcctctcagtcactacatccgaaggaatca
agtgcaatttctatgtatattctagaggatgatggcaacttgttctctgagttgtccagt
gcaaagcattcagtgagctcacctcgagacagcgaacctaaaaatgaacctacacaagtt
aatgctaaacatggaagtattcctctggtagctgaacctgaaacctccactgaaacctca
tattctgggcagaggttaatggacttattcgttttactttgttgtgagaatgcattgtgg
ttgtactctttgaattctgtaattcagggggacagcaactgcattaggaaggtgaatctt
ttaaaaccatgttgttggactgcaaccttcaagaaagatgagaatgagtacgggctagtt
atagtctatcagactggggagattgagataaggtctttgccatgtcttgaagtggtggga
gaaacttctctaatgtcaattctaagatggaacttcaagactaatatggaaaagacaatg
tgttcttcttgtaatggacaaattgtgctgataaatgggtatgaatttgcgttcatatca
gtgttagcttctgaaaatgatttcaggattccagagtctttgccttgtcttcacgataag
gtccttgcagctgctgccaatcccaccaatatatctccaagtcagaagatagtagagggt
actgtccctgcgtatttaggtggacttgtaaagggccttaaaggattaaaggagcacaat
gtggatttgcctggccctgaagttagtaaccaaaattgtgcccacttagataccatattt
tcttgcccaccattcttaaagccctccatggatgaccaagaagttgtggagcttaacata
gatgacattaattttgatgaacctcttgttgtctcatcttcatctcaaaagagcaataat
gatgagaaagataagagaacgaacaaggaaaatttgtttgaaggtgcaaatactgacgcc
aaaccaaaaccaagaacagttgaagaaattaaggctaaatataaaaaagccggggatgca
tcttcagcggctgcagaagcaaggaacaagcttgcagaacgccaggaaaaacttgagaaa
ctccgcgatcgtactgaagagctacaagacggagctcaaaactttgctgatatggcaggt
gaacttgccaaggcgatggagaagcgtaaatggtggaagctctga
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