Pistacia vera (pistachio): 116122759
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Entry
116122759 CDS
T07386
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116122759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116122759
03009 Ribosome biogenesis [BR:
pvy03009
]
116122759
04131 Membrane trafficking [BR:
pvy04131
]
116122759
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvy04147
]
116122759
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116122759
Ribosome biogenesis [BR:
pvy03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
116122759
Membrane trafficking [BR:
pvy04131
]
SNARE
SNARE associated proteins
Others
116122759
Autophagy
Aggrephagy
Other aggrephagy associated proteins
116122759
Exosome [BR:
pvy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116122759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
RuvB_N
AAA_22
AAA_5
AAA_2
AAA_16
AAA_33
AAA_14
TIP49
AAA_17
nSTAND3
AAA_18
Mg_chelatase
NPHP3_N
Zeta_toxin
AAA_28
AAA_24
IstB_IS21
KAP_NTPase
RNA_helicase
Zot
Sigma54_activat
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
116122759
NCBI-ProteinID:
XP_031264431
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MTHPAESSNASSGKKDFSTAILERKKSPNRLVVDEAVNDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCEQPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGVTGNLFDAFLKPYFLESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDEVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNCSW
EDIGGLENVKRELQEVIIIIQYWIKTYLRMFSVFYAPETCFQE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgactcatccggctgaatcctctaacgcgagttcggggaagaaggacttctccacggcg
attttggagaggaaaaaatcgcctaatcggctggtcgttgacgaggcggttaacgatgac
aactccgtcgtcgctttgcatcctgataccatggaaaagctccagcttttccgcggcgac
accattctcatcaaaggaaagaaacgaaaagatacaatctgcattgctcttgctgacgat
acatgtgaacagcctaaaatcaggatgaacaaggttgttagatccaatcttagggttcga
cttggggatgttgtctctgtgcaccagtgcccagatgttaagtatggcaagcgtgttcac
attcttcctattgatgataccattgaaggagttactgggaatctgtttgacgctttcttg
aaaccttatttcttggagtcttatcgccctgtgaggaaaggagatttgttccttgttaga
ggtggaatgaggagtgttgagttcaaggtcattgaaactgatcctggggaatactgtgtt
gttgctccagacactgaaattttctgtgagggggaacctgtgaagagggaagatgaggat
aggttggatgaagtcggttatgatgatgttggtggtgttcgaaagcagatggctcagatt
cgtgagttagtggagcttccattaaggcatcctcagctctttaaatcaattggtgtgaag
ccaccaaaggggatcttactttatggacccccaggttctggaaagactttgatagccaga
gctgtcgctaatgaaactggtgctttcttcttttgtattaatgggccagaaattatgtcc
aaattggctggagagagtgaaagtaatctcaggaaggcatttgaagaagcggagaagaat
gctccatctataatctttattgatgagattgattccattgctcccaagcgagagaagaca
aatggtgaagttgaaagacgtattgtttcacagcttttaactcttatggatgggcttaaa
tcccgagcccatgttattgttatgggggctactaatcgcccaaatagtattgaccctgct
ttgaggaggtttggtagatttgatagggagatagacattggtgttccagatgaagttggg
cgccttgaagttctccgcatccatacgaagaacatgaagctgtctgatgaagttgatcta
gagaggattgctaaagatactcatgggtatgtcggtgctgaccttgctgctctgtgtacc
gaagctgcattgcaatgcatcagagagaaaatggacgtgattgatttggaggatgaaact
attgatgcagagatacttaattctatggctgttacaaatgagcacttccaaactgcactt
ggaacaagcaacccttctgctttgcgtgaaactgttgttgaagttcccaattgcagctgg
gaggacattggaggccttgaaaatgttaagcgtgagcttcaagaggtaataatcattatt
caatactggattaagacatatttgaggatgttttcagttttctatgctccagaaacatgt
tttcaagaatga
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