Pistacia vera (pistachio): 116123860
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Entry
116123860 CDS
T07386
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy00040
Pentose and glucuronate interconversions
pvy01100
Metabolic pathways
Module
pvy_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116123860
Enzymes [BR:
pvy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
116123860
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Nab2-zf4
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
116123860
NCBI-ProteinID:
XP_031265465
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MAKPMSSFVLLVLFLILFFHLSLAIPVTYNVLSLGAKSDGKTDSSKAFLDAWSKACGSTE
AATVYVPPGRFLLGKVEFKGQCNNNDIVIRLDGTLVAPSDYNVIGNAGNWLMFENVNGVS
INGGTLDGQGAGLWTCKKTGKSCPSGATTLEFSNSNNIVINGLTSLNSQMFHIVINGCNN
VKAQGVKVSASGISPNTDGIHVQSSIDVTIMNSRIGTGDDCVSIGPGATNLWIENVACGP
GHGISIGSLGKDQEEAGVQNVTVKTTTFTSTQNGVRIKSWGRPSSGFARNILFQHAIMNN
VQNPIVIDQNYCPDNKNCPDQASGVKISDVKYQDIHGTSASEVAVKFDCSSQYPCSGISL
EDVKLTYNNQPAKASCSHADGSVSGVVQPSSCLLQ
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaccgatgagttcttttgttcttttagtgcttttcttgatccttttctttcat
ttatctttggctattcctgtgacttacaatgtgctcagtttaggagccaaatccgatggc
aaaactgattcttcaaaagcatttcttgatgcatggagtaaagcctgtggctcgaccgag
gccgccaccgtttatgtgccaccggggaggttcttgctaggcaaagttgagtttaaaggc
caatgcaataacaacgatattgttatacgtcttgatggcactcttgtggctccatcagat
tataacgttatcggaaatgctggaaattggcttatgtttgaaaatgttaatggagtttct
attaatggtggcactcttgatggtcaaggtgctggcctgtggacttgcaagaagactggc
aagagttgccccagtggtgccacgacactggagtttagtaactcgaacaatattgtcata
aatggattaacatctttgaatagccagatgtttcatattgttatcaatggctgcaacaac
gtgaaagcacaaggggttaaggtttcagcctcgggcatcagccctaacaccgatggaatt
catgttcaatcttctatcgatgtcacaatcatgaactccaggattgggaccggtgatgat
tgtgtatcaattggccctggtgccactaatttatggattgaaaatgttgcttgtggccct
ggccatggcatcagcattggtagtcttggcaaggatcaagaagaggctggagtgcagaat
gtgacagtaaaaactacgacttttacgagtactcaaaatggagtgaggatcaagtcttgg
ggtagacctagcagtggttttgcaaggaacattctttttcaacatgccatcatgaacaat
gtccaaaatcctatcgtcattgatcaaaattattgccctgacaacaaaaattgccctgat
caggcttcaggggttaaaattagtgatgtgaaataccaagatattcatggaacttctgca
tctgaagttgccgtaaagtttgattgcagttcacagtatccatgctctgggataagcttg
gaggatgtgaagctcacatacaacaatcaaccagctaaagcatcatgtagccatgccgat
ggatcagtttctggcgttgttcagcctagcagttgcttgctccaatga
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