Pistacia vera (pistachio): 116124159
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Entry
116124159 CDS
T07386
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116124159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvy04121
]
116124159
Enzymes [BR:
pvy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116124159
Ubiquitin system [BR:
pvy04121
]
Ubiquitin ligases (E3)
HECT type E3
116124159
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
Arm
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
116124159
NCBI-ProteinID:
XP_031265734
LinkDB
All DBs
Position
Unknown
AA seq
1897 aa
AA seq
DB search
METRSRKRAEASSTAPSISSSSSGPTTRSHANKRPRVAPTTSTTTTTTTAPASSSSATTR
SRHSRALPMDPTSESSGSRHTRRAKISSSNADNSADKGKEKEHNNNNSNNNNNNSDLANT
GRALGLNMDTGMDDDDNDSEGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPSSAMGSA
SSSHQSGRLKKILSGLRADGEEGKQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLL
NHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVTCFVARLLTIEYMDLAEQSLQALK
KISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLL
TNLLQYHDSKVLEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISTSNSGGGQAS
LSTPTYTGLIRLLSTCASGSPLCAKTLLLLGISGILKDILSGSGVSANTSVPPALSRPSD
QIFEIVNLANELLPPLPPGTITLPASSNIFMKGPVVRKSPASSSGKQDDTNVSAPEVSAR
EKLLNDQPELLQQFGMDLLPVLIQIYGSSVNSPVRHKCLSVIGKLMFFSSAEMIQSLLSV
TNVSSFLAGVLAWKDPHVLVPALQIAEILMEKLPGTFSKMFVREGVVHAVDQLILVGNPN
TVPAQASPGDKDNDSVSGTSSRSRRYRRRGGNSNPEGNYSEESKNTVSLNVGSPPSSVEI
PTVNSNLRTAVSASAKAFKDKYFPADPGAAEAGVTDHLLHLKNLCLKLNVGVDDQRTKAK
GKSKASGSRIADISASKEEFLIGVISEMLTELSKGDGVSTFEFIGSGVVAALLNYFSCGY
FSKERISEANLLKLRQQALKRFKSFLSVSLPSSVDAGSVAPLTVLVQKLQNALSSLERFP
VVLSHSSRSSGGSARLSSGLSALSQPFKLRLCRAQGEKSLRDYSSNVVLIDPLASLAAVE
EFLWPRVQRGESGQKPTASVGNSESGTTPTGAGASSPSTSAPAARRHSSRSRLSVNIGDA
AKKEPSQEKGSSSSKGKGKAVLKSAQEEARGPQTRNAARRRAALDKDAQLKQVNADTSSE
DEELDISPVEIDDALVIEDEDISDDDDDDHEDVLKDDSLPLCMPDKVHDVKLGDLAEDSA
IASAASDSQTNPASGSSSRAATIRGSDSADFRSGNSYGSRGAMSFAAAAMAGLGSANGRG
VRGGRDRHGRPLFGSSNEPPKLIFTAGGKQLNRHLTIYQAIQRQLVLDEDDDERYGGSDF
ISSDGSRLWSDIYTMTYQRADSQADRMSIGGSSSTGPSKSTKSGSASNSNSDAQSHRMSL
LDSILQGELPCDLEKSNPTYNILALLRVLEGLNQLAPRLRAQMVSDSYAEGKISSLDEQS
ATGARVPSEDFVNSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFEIRRQYFY
STAFGLSRALYRLQQQQGADGHGSVNEREVRVGRLERQKVRVSRNRILDSAAKVMEMYSS
QKAVLEVEYFGEVGTGLGPTLEFYTLLSRDLQKVGLGMWRSNSSSEKPSMEIDGGEDKNG
KSNNVTGDLVQAPLGLFPRPWPPNVDTSEGSQFSKVIEYFRLVGRVTAKALQDGRLLDLP
LSTAFYKLVLGQDLDLHDILSFDSEFGKILQELHVIVCRKQYLESASCDNRDAISDLRFR
GTPIEDLYLDFTVPGYPDYILKPVDENVDINNLEEYISLVVDATVKTGIMRQMEAFRAGF
NQVFDISSLQIFTPHELDHLLCGRRELWEADTLVEHIKFDHGYTAKSTAIVNLLEIMGEF
TPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTASNAVTNGTGALESADEDLPS
VMTCANYLKLPPYSTKEIMYKKLLYAISEGQGSFDLS
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagccggaagcgggcggaggcctcctcaactgccccttcgatttcgtca
tcttcttctgggcctaccactcgttctcacgccaataaacgacctcgtgtagctcccact
acctcgacgacgacgacaacaacaaccgcccctgcctcatcgtcttctgccaccacgcgc
tcacgtcactcacgcgctctccccatggaccccacctctgaatcctccggttctcgccac
actcgccgcgccaaaatctcctcatccaacgccgacaattccgccgacaaaggtaaagaa
aaagaacacaataataataacagcaataacaataataacaattcggatttggccaacacg
ggtcgggcacttggtttgaatatggatacgggtatggacgacgatgacaatgacagcgag
ggtggagttggaattttgcatcaaaatctgacctcagctagcagtgccttgcaaggactg
ttgaggaagctcggagctggattggatgatcttttgccgtcatcagccatggggtcggcg
tcgtcatcccatcagagcggtagattgaagaagattttatcggggctgagggcggacggc
gaggaggggaagcaagtggaagcgttaacgcaactttgcgagatgttgtctattggaacg
gaggagagtttgagtactttctcagtggattcatttgtgccggtgctggttgggttgctg
aatcatgagagtaatcctgatattatgttgcttgcggctagggctcttacacatttgtgt
gatgtattgccatcttcttgtgccgctgtcgtgcattatggggcggttacgtgtttcgta
gctcggttgctaacaattgagtacatggacttggctgaacagtctctgcaagctttaaag
aagatatcgcaggagcacccaactgcctgtttgagagcaggtgctctaatggcggttctt
tcgtacctggatttcttctccacaggagttcagagggtagcattgtccactgctgcaaat
atgtgcaagaaactcccttctgatgctgctgactttgtgatggaagctgttcccctgttg
acaaaccttcttcagtaccatgattcaaaggtgttggaacatgcttctgtttgtttaact
cgaattgctgaagcattcgcgtcatctccggacaagttagatgaactatgtaatcatgga
ctggttacacaagctgcctctctcatttcaaccagtaattctggaggtgggcaggcatct
cttagcacaccgacctatacgggtttaatccgattgctgtccacttgtgctagtggatcg
cctctttgtgccaaaactttgctcctccttgggatcagtggaattctgaaagatatacta
tcagggtctggtgtttctgctaatacatctgttccacccgctttgagtagaccatcagat
cagattttcgagatagtcaacctggcaaatgagctcctccccccgttgccaccaggaact
attaccctcccagccagctccaatatatttatgaaaggtcctgtggtgaggaagtctccc
gccagtagttctgggaaacaggatgatacaaatgtaagtgctcctgaggtttctgctcga
gagaaattactaaatgatcagcctgaacttctgcagcagttcggaatggatcttcttcct
gttctaatacagatctatggttccagtgttaacagtccggttcgccacaaatgtctttct
gttattgggaaattgatgttcttcagcagtgcggagatgattcagtctctgttaagtgtg
acaaacgtatcaagctttttagctggtgttttggcatggaaagatccacatgtcttggtt
cctgccctccaaattgctgagattcttatggaaaagcttcctggtacattctccaagatg
tttgtcagagaaggtgtggttcatgctgtagatcaacttattttagttggtaatccaaat
actgttcctgcccaagcatctcctggtgataaggacaatgattctgtatctggtacatca
tcacgttctaggcgttatagacgacgcggtggtaactcaaatcctgaaggaaattattca
gaagaatcaaagaatactgtctcactaaatgttggttcacccccaagttcagtagaaatt
ccgacggtgaattctaatctccgaactgcagtcagtgcaagtgctaaagcattcaaggac
aagtactttcctgcagatcctggtgctgctgaagctggagttacagatcatcttttacat
ctgaagaatctttgtttgaagttgaatgttggtgttgatgaccaaaggactaaagcaaag
ggaaaatctaaagcatctgggtcccgcatagctgatatatctgcgagtaaggaagagttt
ttgattggggtgatatctgagatgttaactgaactgagcaaaggggacggtgtatccact
tttgagtttattggcagtggtgttgttgcagctttgttgaattatttttcttgtggttat
ttctctaaggaaagaatttcagaagccaatttgctcaagcttcgccaacaagctcttaaa
agatttaagtcatttctttctgtttcactcccatctagtgtggatgcgggaagtgtggct
cctttgactgtcttagttcagaagctccaaaacgctttgtcctcactagagcgttttcct
gttgtgctgagccattcatctaggtcatctggtggaagtgctcgtctctcttctggactg
agtgcattatctcagccttttaagttgcgcctctgtcgagctcaaggagaaaaatctctc
cgtgattattcttctaatgttgtactgattgatccattagcaagtttagcagctgttgaa
gaatttctttggcctcgagttcagcgaggtgaatctggccaaaagcctacggcatctgta
gggaattcagagtctgggaccacacctactggagctggtgcttcgtccccttctacctca
gctcctgcagctcgtcgtcattcttcaagatccagattatctgttaatatcggagatgct
gctaaaaaagaaccttcccaagagaagggctcaagctcatcaaaggggaagggtaaagct
gttttgaagtctgctcaggaggaggcaagaggacctcaaacaagaaatgctgctcgcaga
agagcggctctagacaaagatgcacaattgaagcaagtgaatgcagatacaagttctgag
gatgaggaattggatatatctccagtggagattgatgatgcattggtgattgaagatgag
gatatctctgatgatgatgatgacgatcatgaagatgtgctgaaagatgattctcttcct
ctttgcatgcctgataaagtacatgacgtaaaattgggtgatttggctgaggatagtgcc
attgcttcagcagctagtgatagtcagactaacccagcttctggatctagtagtagagct
gctacaatcaggggttctgattctgctgactttaggagtggcaattcttacggttcaagg
ggtgcaatgtcgtttgctgctgctgctatggctgggcttggttctgctaatggcagaggt
gtaaggggaggcagagatcgacatggacgtcctctgtttggcagttccaatgagcctcca
aagttgatattcactgctggtggtaaacagcttaacaggcatttgactatttatcaggcc
attcaacgtcagcttgttctggatgaggatgatgatgagaggtatggtggcagtgacttc
atatcaagtgatggaagcagactgtggagtgatatttacactatgacataccagagagca
gacagccaagctgataggatgtccattggaggatcaagttctaccggtccatcaaaatct
acaaaatctggttctgcttccaattccaactctgatgcccaatcccatcgtatgtcactt
ttagacagcatcttgcaaggggaacttccttgtgatttggagaaatctaatcctacatat
aatatactggcattgttgcgtgtactagagggtttgaaccagcttgcacctcgtttgaga
gcccagatggtttctgatagttatgctgaggggaaaatatcgagtctagatgaacagagt
gcaactggtgctagggtaccttcagaggattttgtaaacagtaaactcactcctaaatta
gctcgacaaattcaagacgcccttgctttgtgcagtggtagtcttccctcgtggtgttat
cagttgacaaaagcatgcccgttcttgtttccgtttgagatccggcgtcagtacttctat
tcaactgcttttgggttatctcgtgctttatatcgtcttcagcagcagcagggtgctgat
ggtcatggatcagtaaatgaaagagaggtgagagttgggagattagaacgccagaaagtt
cgtgtctctcggaatcgtattttggattctgctgcaaaagtaatggagatgtattcgagc
caaaaggctgtccttgaagtagaatattttggggaagttggcacaggtttgggtcccacc
cttgagttttatacacttctaagtcgtgatctccagaaagttggacttggaatgtggagg
tcaaattcttcatcagagaaaccatctatggaaattgatgggggggaagacaaaaatggc
aaatccaataatgtaacaggagatctagttcaagctccactagggttgttccctcgacct
tggcctccaaatgttgatacttctgaaggtagccagttttctaaagtcattgagtacttc
cggttggttgggcgtgtgacggctaaagctcttcaagatgggaggcttttagatctgcca
ttgtcaacagcattttataaacttgtgcttggtcaagaccttgatttgcatgatattctt
tcttttgattctgagtttgggaagattttgcaagagttgcatgtcattgtttgtcggaaa
caatatttagaatcagcaagttgtgataatcgtgatgcaatttctgacttacgattccgt
gggaccccaattgaggatctctacttggattttactgttcctgggtatccagactacatt
ttgaaaccagttgatgaaaacgttgacatcaataacttagaggagtacatatccctcgta
gttgatgcaactgtgaagactggaattatgcggcaaatggaagcatttagagcaggcttc
aatcaggtttttgacatctcatcactgcaaatatttacgcctcatgagttggaccatctg
ctttgtggccgtagagagttgtgggaggctgatacgcttgttgagcatataaaattcgat
catgggtacactgccaagagcactgcaattgttaacttactagagatcatgggggagttc
acaccggatcagcagcgggccttctgtcagtttgttactggtgcacctaggcttccacca
ggtggcctggcggtgcttaatccaaagctgacaatagtgagaaagcattcgtcaactgca
agtaatgcagtgactaatggaactggggcattggaatcagcagatgaggatttgccaagt
gtgatgacatgtgctaattacctgaagcttcctccgtactctaccaaggaaattatgtac
aagaaactgctatatgcaatcagtgaagggcagggatcttttgatttatcatga
DBGET
integrated database retrieval system
