KEGG   Pistacia vera (pistachio): 116124250
Entry
116124250         CDS       T07386                                 
Name
(RefSeq) ubiquitin receptor RAD23b-like
  KO
K10839  UV excision repair protein RAD23
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03420  Nucleotide excision repair
pvy04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    116124250
  09124 Replication and repair
   03420 Nucleotide excision repair
    116124250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:pvy03051]
    116124250
   03400 DNA repair and recombination proteins [BR:pvy03400]
    116124250
Proteasome [BR:pvy03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    116124250
DNA repair and recombination proteins [BR:pvy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      116124250
SSDB
Motif
Pfam: ubiquitin UBA Rad60-SLD CUE TECR_N SOG2 Dsc3_N UBA_RAD5A Rad60-SLD_2 MmeI_C DUF515 Ubiquitin_4 Ubiquitin_2
Other DBs
NCBI-GeneID: 116124250
NCBI-ProteinID: XP_031265808
LinkDB
Position
Unknown
AA seq 237 aa
MKLTVKTLKGSHFEIKVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVSEDGFLVVMLSKSKTSGSAGASSAQPASTTPSTTAPSSNSTPAPETSAQAPAPKTT
TSASDATTADANTDTYGQAASTLVAGNDLEQTIQEIMDMGGGTWDKETVTRALQAAYNNP
ERAVDYLYSGIPETAEVAVPVARFPASQASETGAAEDPPVSGAPNSSPLNMFPQVNF
NT seq 714 nt   +upstreamnt  +downstreamnt
atgaagctcactgtaaagactctcaagggcagccatttcgagattaaggttcagccttcc
gatacggttatggctgtcaagaagaacatagaagatgtacaaggaaaagacaattaccct
tgtgggcaacagttgttaattcacaatggtaaagtgttgaaagatgagacaactttagct
gataataaagtctctgaagatggttttcttgttgttatgcttagcaagagtaaaacatcg
ggctcagctggggcttcatctgctcagcctgcttccaccactccatcaacaactgcaccg
agctccaattctacacctgcaccagaaacctctgcacaagcaccggctccaaagaccacc
acatctgcttctgatgcgacaacagctgatgcgaatactgatacctatggtcaagctgct
tcaacgttagttgctggaaatgatcttgagcagacaattcaagaaataatggatatgggt
ggtggaacctgggacaaagaaactgttactcgtgctcttcaagcagcttataataaccca
gagcgagcagtggattacttgtactctggcattcctgaaacggccgaagttgctgtgccg
gtggctcgctttccggcaagtcaggcaagtgaaactggtgcagcagaagatccaccggtg
tctggagcacctaattcctctccgttgaatatgtttccccaggtaaacttttag

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