Pistacia vera (pistachio): 116124302
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Entry
116124302 CDS
T07386
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin receptor RAD23b-like
KO
K10839
UV excision repair protein RAD23
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03420
Nucleotide excision repair
pvy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116124302
09124 Replication and repair
03420 Nucleotide excision repair
116124302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvy03051
]
116124302
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116124302
Proteasome [BR:
pvy03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
116124302
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
116124302
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
UBA_7
ubiquitin
CUE
Rad60-SLD
UBA_3
UBA_RAD5A
Sporozoite_P67
Motif
Other DBs
NCBI-GeneID:
116124302
NCBI-ProteinID:
XP_031265876
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MKLTVKTLKGSHFEIKVQPSDTVRMAVKKNINVQGKQLPLWQQLLIHNGKXVESETTLAD
NKVSEDGFSVVCLARVKLGLAGASSAQPASTTSTTXAPSSNSTPAPETSAQAPANTDTYG
QAASTLVAGNDLEQTIQEIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETAEV
AVPVARFPASQASETGAAEVPPVSGAPNSSPLNMFPQETLSGAAAGGLGSLDFLRNNQQF
QALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHQAEFLQLINEPIDGSEGDIFDQPEQ
DMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDFED
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcactgtaaagactctcaagggcagccatttcgagattaaggttcagccttcc
gatacggtacgtatggctgtcaagaagaacataaatgtacaaggaaaacaattacccttg
tggcaacagttgttaattcacaatggtaagnntgttgaaagtgagacaactttagctgat
aataaagtctctgaagatggtttttctgttgtatgcttagcaagagtaaaactcgggcta
gctggggcttcatctgctcagcctgcttccaccacctccacaacanctgcaccgagctcc
aattctacacctgcaccagaaacctctgcacaagcacctgcgaatactgatacctatggt
caagctgcttcaacgttagttgctggaaatgatcttgagcagacaattcaagaaataatg
gatatgggtggtggaacctgggacaaagaaactgttactcgtgctcttcaagcagcttat
aataacccagagcgagcagtggattacttgtactctggcattcctgaaacggccgaagtt
gctgtgccggtggctcgctttccggcaagtcaggcaagtgaaactggtgcagcagaagtt
ccaccggtgtctggagcacctaattcctctccgttgaatatgtttccccaggagacactt
tcaggtgctgctgctggtggacttggatccttggacttccttagaaataatcaacagttt
caagctttgcgttcaatggtgcagtcaaatccacagattttacagcctatgcttcaggag
cttggaaagcaaaacccccagcttttaagactaattcaagaacaccaagcggagttcctt
cagttaataaatgaacctattgatggttctgaaggggatatatttgatcagcctgagcaa
gacatgccacatgcaatcaatgtcacccccgccgaacaggaggctatccaacgactggaa
gcaatggggtttgatagagcccttgtcatcgaggcatttttggcatgtgatcgtaacgaa
gaattggcggccaactacctactggaaaatgctggagattttgaggattga
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