KEGG   Pistacia vera (pistachio): 116124380
Entry
116124380         CDS       T07386                                 
Name
(RefSeq) helicase and polymerase-containing protein TEBICHI isoform X1
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
pvy  Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvy03400]
    116124380
Enzymes [BR:pvy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     116124380
DNA repair and recombination proteins [BR:pvy03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    116124380
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII Helicase_dom4_arc HHH_5
Other DBs
NCBI-GeneID: 116124380
NCBI-ProteinID: XP_031265965
LinkDB
Position
Unknown
AA seq 2204 aa
MASGSPRKRIDQFFASKKRKSLSPGLKSGKVEKDAKLAIEGSPSGKGTLDNYLRTSQEDN
QTTKPSQGAKDLLAKLEPVKRNLSLEINKFSKDESKQPLLSAQVQPEAFEVFKSIQKVTT
QVSSEGGCDSLINDCSVSAHVTENSDLKQFANNFLSLYCSELHTSVSSTSKVKVKDHKRH
GSPSLIDKEEKIPKKKHCNSNQSQSGGETTHSNAKNPEETQCGLIVKNEMFVSRSSQEMM
DCDGPVALQSSLKKCNNSFKSTLNSTTCCTPGSSIIKTYVRGTPKSTCGSSIFSPGEAFW
NEAIQVADDLFAQPDNLPAQADEGINYAKSQNEINNSHNLRNKNCDKLMLDEGGSKFWHA
TYDRARDSLKAMEHMKDSDKEASPLPVKHFDFLCEDKNLDGGTPGHVAADSSETRMHRVS
EVSEKGSVNRIGFQTMKIITHYDQAQKIEVMTEVQAKVSVHMLQKRKVDSSSQDNVSITL
ESPDNEIKKLIGTNESNEESTPSSYVMHKDCLKLTSWLPSEICSIYEKRGISKLYPWQVD
CLQVDGVLQRRNLVYCASTSAGKSFVAEILMLRRVISTEKMALLVLPYVSICAEKAEHLE
VLLEPLGKHVRSYYGNQGGGALPQDTSVAVCTIEKANSLINRLLEEGRLSEIGIIVIDEL
HMVADQTRGYLLELLLTKLRYAAGEGVSESSSGESSGMSSGKVDSAHGLQIVGMSATMPN
LAAVADWLQAALYETDFRPVPLEEYIKVGNTIYNKNFDIIRTVPTAADLGGKDPDHIIEL
CNEVVQEGHSVLIFCSSRKGCESTARHVSKFLKKCSISVHSRDGEFADITSAIDALRRCP
AGVDPILEETLPSGVAYHHAGLTVEEREIVETCYRKGLVRVLTATSTLAAGVNLPARRVI
FRQPRIGRDFIDGTRYKQMAGRAGRTGIDTKGESVLICKAEEVKRIIGLLNESCPPLHSC
LSEDKNGMIHAILEVVAGGIVQTAEDVHRYVKCTLLNSTKPFQDVVKSAQDSLRWLCHGK
FLEWNEDTKLYSTTPLGRAAFGSSLCPEESLTVLDDLSRAREGFVLATDLHLVYLVTPIN
VEVEPDWELYYELYMELSALDQSVGNRVGVAEPFLMRMAHGAPIRTSSRSRDGSKGLHAK
SDYRHGITNSSMLSEEQTIRVCRRFYVALILSRLVQETPVLEVCEAFKVARGMVQALQEN
AGRFASMVSVFCERLGWHDLEGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAG
LRTPLAIAEATVPEIVKALFESSSWVAQEGSAQRRIQLGVAKKIKNGARKIVLEKAEEAR
IAAFSAFKSLGLDVPQFSRPLLLTTGDNPTRQEEATTFFRDYTSSSFVDPIKTNMVLAKP
HKEADENMEKVALENAGETLRKTSDGGLVASVEVHSTTALQHNFVTENLEVPTVGSGIGG
VKCNANVEQIKNADTTLSIRPEKNGIGNITPSGHLDKLQDRPSQGLCLFKDSAWTKGPIN
ATNTPGGFNHFLDIWEATQEFYFDIHYNKQSKVNHGALFEIYGIAICWENSPVYYVNLPK
DLLSSGSKRNDGLVISGSDDKSDSLPPERQLEIMKQRWKRIGVIMEKRDVRKFTWNLKVQ
NQVLKCAAVSAQRFGCRNLVGKSLGLELIDSLYSLSPIYVKDGIDLCIVAWILWPDEERS
SNPNLEKEVKKRLSTEAAAAANRSGQWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLVSE
GLVEALMNIEIPLVNVLADMELWGIGVNMEGCLQARNLLQKKLRYLEKEAYKLAGIKFSL
YTAADIANVLYGHLKLPIPEGHNKGKQHPSTDKHCLDLLRHEHPIIPVIKEHRTLAKLLN
CTLGSMCTLARLSTSGQKYTLHGHWLQTSTATGRLSMEEPNLQCVENMVEVKINDKDKCE
DNLDADHYKINARDFFVPTQENWLLLTADYSQIELRLMAHFSKDSALIDLLSKPKGDVFT
MIAARWTGKPEDSIGLHEREQTKRLIYGILYGMGPNTLSEQLNCCSDEAKEKIKSFKSSF
PGVAAWLHEAVSSCQQKGYVETLKGRKRFLSKIKFGNCKERSKAQRQAVNSICQGSAADI
IKIAMINIHSVIVEGVYRSETTSAAATKFQMLKHRCRVLLQVHDELVLEVDSTVVKEAAL
LLRKCMESAAMLLVPLHAKLKVGRTWGSLEPIQADKGADIVPDL
NT seq 6615 nt   +upstreamnt  +downstreamnt
atggcgtctggttcgcctcgtaagcgtatcgatcagttttttgcttcaaagaagagaaaa
tcattatcacctggtttgaagagtgggaaagttgagaaagatgcaaaattagccattgaa
gggtctcctagtggcaaaggaactttggacaattatttgagaacttcacaggaggataat
caaactaccaagccttcacagggagctaaagatttgttggctaagctagagccagttaaa
agaaatttatcattggagataaataaattctccaaagatgaaagtaaacagcccctgtta
tcagctcaagtgcaacctgaagcttttgaagtatttaaaagcattcagaaggtgactact
caggtttcatctgaggggggctgtgatagtctcattaatgattgctcagtttctgctcat
gtcacagaaaattcagatttgaaacagttcgcaaataactttctatctttgtattgcagt
gaactccatacaagtgtaagttcaacatcaaaggtaaaggtgaaagaccataagagacat
ggtagtccatcattaatagataaggaggaaaagatacccaagaagaagcattgcaattcc
aatcagtcacaatcaggaggtgaaaccacacattctaatgcaaagaatcctgaagaaaca
caatgtggtttaattgttaaaaatgaaatgtttgtttcacgttcttcccaagagatgatg
gattgtgatggtcccgttgcgcttcaatcaagcttgaaaaaatgcaacaattcattcaaa
tcaactttgaattcaacaacttgctgtacacctggatcatcaattattaaaacatatgtt
cgtggaacccccaaatcaacatgtggaagctccatattttctcctggagaagctttctgg
aatgaagcaattcaagttgctgatgatttgtttgctcaacctgataaccttcctgctcaa
gctgacgaagggatcaattatgctaaaagccagaatgagataaataattctcacaattta
agaaacaaaaattgtgacaagttaatgttggacgaaggtgggagcaaattttggcatgca
acctatgatagggccagagattctttaaaggcaatggagcatatgaaagattcagataaa
gaagcatccccactacctgttaagcattttgactttttgtgtgaggacaaaaacttggat
gggggcaccccaggtcatgttgctgcagatagctcagaaactaggatgcatcgagtcagt
gaagtatctgaaaagggctctgtaaatcgcatagggtttcaaacaatgaaaattataact
cattatgaccaagctcagaaaattgaagtgatgactgaagtacaagcgaaggtttctgtt
catatgttacaaaaaagaaaagtggattcatcaagtcaagataatgttagtatcacattg
gaatcacctgataatgaaatcaagaaattaattggtactaacgaatccaatgaagaatct
actccttcaagttatgtgatgcataaagactgtttaaagcttaccagttggcttccttca
gaaatatgtagcatatatgaaaagagaggaatttcaaaactatatccatggcaggttgac
tgccttcaggtggatggtgttttgcagaggaggaatcttgtctattgtgcatcaacaagt
gctggaaaaagttttgttgcagaaattttaatgttacggcgggtaatctcaactgagaaa
atggcattacttgtgcttccttacgtatcaatttgtgcagaaaaggcagaacatctggaa
gtccttcttgaaccacttggtaagcatgtgcgtagttattatggaaaccagggtggtgga
gcacttcctcaagatacttctgtagctgtatgcactatagagaaggcaaactctttaatc
aatagactgctggaagagggtcgtttgtcagaaattggaattattgtgatagatgaactg
cacatggttgccgatcagactagaggttatcttttggaattgctgttaacaaagcttcgt
tatgcggctggtgaaggagtttcagagtcaagtagtggagaaagttcaggtatgagcagt
gggaaggttgactctgctcatggtctgcaaattgttgggatgagtgctaccatgcctaat
ttggcagcggttgctgactggctgcaagcagcattatatgaaacagattttcgacctgtt
ccattagaggaatacattaaagttggtaacaccatttataataagaatttcgacattatt
agaacagttccaaccgcagctgaccttggtgggaaagatccagatcatattattgaactc
tgcaatgaggttgttcaagagggtcattcggtattaatattttgctctagccgaaaagga
tgtgaatcaactgcaaggcatgtctcaaagttcctcaagaaatgttctatcagtgtccac
agtcgtgatggagagtttgctgatattacttcagctattgatgccttgcgaaggtgtcct
gctggagtggatcctatattagaagaaactcttccttctggtgttgcttatcaccatgct
ggactcacagttgaagaaagagagattgttgaaacctgctatcgtaaagggcttgtacgt
gtcttaactgctacatctaccttagctgctggagttaatctgcctgccaggagagtcatt
tttcggcaacccaggattggccgtgatttcattgatgggacaaggtacaagcagatggct
ggtcgggcaggtcggactggaatagatacaaaaggagaaagtgttcttatttgcaaagca
gaagaggtcaaaagaattattggacttcttaatgaaagctgcccaccattgcattcttgt
ttatctgaagataagaatggaatgattcatgcaattttagaagttgtggctggtgggatt
gttcaaactgctgaagatgttcatagatatgttaaatgcactcttctcaattctacaaaa
ccatttcaagatgtggtaaaatcagcacaggactctcttcggtggttgtgccacggaaag
tttcttgagtggaatgaggatactaagttgtacagtactacacctctcggacgtgcagct
tttggcagttctctttgcccagaagaatcacttaccgtgttggatgatctttcaagggca
agagaagggtttgtacttgcaacagatttgcatttagtttatctagtgacaccgattaat
gttgaagttgaaccagattgggaattatattatgagctgtacatggagttgtcagccctt
gaccagtcagttggcaatcgagtgggagtagcagaaccatttttaatgcgaatggcacat
ggtgcacctatacgcacatcaagcagatcaagagatggtagcaaagggttgcatgccaaa
tctgattacagacatgggatcaccaacagtagtatgctttcagaggagcagacaattaga
gtgtgtagacgattttatgttgccctcatcctgtcaagattagtgcaggaaactcctgtg
cttgaggtttgtgaagcttttaaagtggccagaggtatggttcaagctttgcaagagaat
gcaggaaggtttgcatctatggtttctgtgttctgtgagaggcttggatggcacgatcta
gaaggcttggttgcgaagttccagaatcgtgtttcatttggagtgagggccgagattgta
gaacttactacgattccttatgtgaagggttctcgagcaagagcactctataaagctggc
ttacgtacacctctggcaattgctgaagcaaccgttcctgaaattgtcaaagctcttttt
gaatcttcatcatgggtagcacaagaaggttcagcacaaagacgcatacagttgggagtc
gcgaagaagataaaaaatggtgcacgcaaaattgttcttgaaaaagctgaagaggccagg
attgctgccttctcagctttcaaatctcttgggttagatgtcccacagttttctcgacca
ttattattgactactggtgataatcccactaggcaagaagaagcaactaccttctttagg
gattatacttctagcagctttgttgatccaataaaaacaaacatggttttggctaagcca
cataaagaagcagatgagaacatggaaaaagttgctctggaaaatgcaggggaaactttg
agaaaaacttcagatggtggtttagtggcttcagtggaagtacactcaactactgccttg
caacataactttgttactgaaaatctagaagtaccaactgtaggatcaggaattggaggt
gttaagtgtaacgctaatgttgagcaaataaaaaatgcagatacaactctctctattcgg
ccagaaaaaaatggtattggaaacataacacctagtggtcatcttgataaattacaagat
cggcccagtcaaggtctgtgtcttttcaaggacagtgcttggacgaagggtcctattaat
gcaacaaatactcctggaggatttaatcattttttggatatctgggaagccacccaggaa
ttctattttgatatccactataacaaacaatcaaaagtaaatcatggtgctctctttgag
atatatggcatcgcaatctgttgggagaattctcctgtgtattatgtcaatcttcctaag
gatctgttgtcatctggcagcaaaagaaatgatggcttggttatttctggatctgatgat
aagagtgattctctacctcctgagcgtcagttagagataatgaagcaaagatggaaaaga
attggtgtgattatggaaaaaagagatgttagaaaatttacttggaatttgaaagttcag
aatcaggtgcttaagtgtgctgcagtttccgctcagagatttggttgccggaatcttgtg
gggaaaagtttaggacttgaactcatcgacagcctgtactcgttatctccgatttatgtc
aaagatggaattgacttgtgcattgtggcttggattctttggcctgatgaggagagaagc
tctaatccaaacctggagaaggaagttaagaaaagattatccactgaggctgcagcagca
gctaatagaagtggtcagtggaagaatcagatgcggagagctgcacataatggttgctgc
cgccgggttgctcagacacgtgccctatgttctgttctctggaagttgcttgtttctgaa
ggacttgttgaagcgcttatgaacattgaaattccattggtcaatgtccttgctgacatg
gagctttggggaataggtgtcaacatggaagggtgtcttcaggcccgtaatttgttgcag
aaaaagcttaggtatcttgagaaggaagcttataaattggctggcataaaattttcatta
tatacagcagcagatattgcaaatgtcctgtatggacacttgaagctgccaatacctgaa
gggcacaacaaagggaaacaacatcctagtactgacaagcattgtttggatcttttaagg
catgagcatcctattattccagtaattaaagagcatcgaacattggcaaagctcttaaac
tgtacactgggatcaatgtgcacactagctaggctatctacaagtgggcaaaaatacaca
ctacacggtcattggctccaaacatcaacagctactggtcgactttcaatggaggaacct
aatcttcagtgtgttgagaatatggttgaagtcaaaataaatgataaggataaatgtgaa
gacaatttagatgctgatcactacaaaattaatgctcgtgatttttttgttcccacccag
gagaactggttattattaacagcagattattctcagatagaattgcggctcatggcacac
ttttctaaagattccgctctgatagacctccttagtaagccaaaaggtgatgtttttacc
atgatcgcagcaagatggactggaaagccagaagattctattggcttgcatgagcgagaa
cagaccaaaaggttgatctatggcattctgtatggaatgggtcctaatactctttcagag
caactaaattgctgttcagatgaagctaaagaaaaaattaaaagcttcaaaagttctttt
cctggtgttgcagcctggcttcatgaagcagtttcatcttgccagcaaaaaggatatgtg
gaaaccctaaaaggaagaaagcggttcttgtcaaaaatcaaatttggaaattgtaaagaa
agatctaaggctcagaggcaagcagtgaattctatttgtcagggatcagctgctgacatt
atcaagattgcaatgataaatatccactctgtcattgttgaaggagtttataggtcagaa
actacctctgcagctgcaactaagtttcagatgctgaagcatcgctgccgagttctttta
caggtacatgatgagttagtattagaagttgactcaactgtggttaaggaagctgcattg
ttgctacgaaagtgcatggaaagtgctgccatgcttcttgttcctttgcatgccaaactc
aaagttggaagaacatggggttctttggaacctattcaagctgataaaggtgcagatatt
gtgcctgatttatag

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