Pistacia vera (pistachio): 116125111
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Entry
116125111 CDS
T07386
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03030
DNA replication
pvy03420
Nucleotide excision repair
pvy03430
Mismatch repair
pvy03440
Homologous recombination
pvy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116125111
03420 Nucleotide excision repair
116125111
03430 Mismatch repair
116125111
03440 Homologous recombination
116125111
03460 Fanconi anemia pathway
116125111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvy03000
]
116125111
03032 DNA replication proteins [BR:
pvy03032
]
116125111
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116125111
Transcription factors [BR:
pvy03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116125111
DNA replication proteins [BR:
pvy03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
116125111
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
116125111
MMR (mismatch excision repair)
116125111
DSBR (double strand breaks repair)
HR (homologous recombination)
116125111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
zf-CCHC
POT1
RADX
CDC24_OB3
DUF223
zf-CCHC_4
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
116125111
NCBI-ProteinID:
XP_031266690
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MAGILFLQLHHLTKRVLLWRNNCYSKPEPGARFSGVGAPVDKPNVSGTSPQHANMRMNQL
PGNSYSSNSDPARYVTTNETSSYSKSESGARFSGGSGSFNNQNMSFGDPRPELSRSYQSN
YARKPQPAYMQPPAMFGNRGQVAKSETLPRIIPIGALNPYQGKWTIKARVTSKGELRHYN
NQRGDGKVFHFDLLDSDGGEIRATCFNAVVDQFYHQVEAGKVYLISRGTLKPAQKTFNHL
HNDLEIFLDTTSMVQLCVEDDNSIPQQQFHFCSISDIEAMENNSVVDVIGVVSFISPAAS
IMRKNGTETHKRTLHLKDMSGRSVELTLWGTFCNDDGQRLQEMCDSGIFPVLAVKSARVN
DFNGKAVGTILSSQLFMEPDFPEAHKLREWFDKEGKNIQSVSISRETLSVVRSDIRKTIS
QIKDEGLGTKEKPDWITVNATVVYIKFDNFCYTACPIMIVDRPCNKKVTNNGDGRWHCDR
CDQSVAECDYRYIIQFQIQDHTGLTWVNAFQECGEEILGISAKDLYYLKYVDQNEEKFSE
TLRNATFSKYIFKLKVKEETFGDEQRVKSTVVKVEKYNHSSDTRFLLDMMDKLKSGDLSS
YTSKAESSVPNSGMSNRGAGSIGNRQPAPAFANYVGTNSNASRDFGLMANQMGQYGNQYS
GSRLAVAGTPMQECCSSCGAAGHSSANCPSIMSGPGQSMAGGYSNRVSPGVGGGVGGGAS
GECYKCHKFGHWAKDCPGRNTAPPAYGSSGIGISPGRYGNAPRQQVGGF
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcatcttgtttctacagcttcatcatctcacgaagcgtgtacttttgtggagg
aacaattgttattctaaaccagagcctggtgctagattttctggtgttggtgcgccagtt
gataaaccaaatgtaagtggtacatctccccaacatgctaacatgagaatgaatcaatta
ccgggtaattcatattccagcaattctgatccagcaagatatgttacaacaaatgaaaca
tccagttactctaaatcagagtctggtgctagattttctggtggatcaggatcatttaac
aatcagaacatgagttttggtgaccctaggccggaactttcccggtcttatcaaagcaat
tatgctcgtaagcctcaaccagcctatatgcagccacctgctatgtttgggaacagagga
caagtggctaagagtgaaacacttcccaggataattcccattggtgctcttaatccctac
cagggcaagtggacaatcaaggctcgtgtaacatccaagggagaacttaggcactataac
aatcaacgtggtgatggtaaagttttccattttgatcttcttgactctgatggtggcgaa
atcagggcaacctgctttaatgcagtggtggaccaattttaccaccaagttgaagcaggt
aaagtttatttgatttctaggggaactttaaaacctgctcaaaagaccttcaatcacctt
cataatgatcttgaaatttttcttgatactacgtcaatggtacagctgtgcgtggaggat
gacaattcaattccacaacagcagtttcatttctgttccataagtgatattgaagccatg
gagaacaactctgttgtggatgttattggtgtggtctcatttattagtccagctgcttca
ataatgagaaaaaatggtactgaaactcacaagagaaccctccatttgaaagatatgtcc
gggcgaagtgttgaattaaccctatggggaaccttctgtaatgatgacggacaaagactg
caagaaatgtgtgattctgggatctttccagttcttgctgtgaaatcagccagggtcaat
gattttaatgggaaagcagtggggactattttgtcaagtcagctgtttatggaacctgat
tttcccgaggctcacaagttaagagaatggtttgacaaggaaggaaagaatatccagtca
gtctccatttccagggaaacattgagtgtggttaggtcggatatccgaaagactatatct
caaattaaagatgagggtttagggacaaaggagaagccagattggatcactgtcaatgca
acagttgtatacataaaatttgacaatttttgttacacagcttgtcctatcatgattgtg
gatcgaccatgcaacaaaaaggttacaaataacggagatgggaggtggcattgtgatagg
tgtgatcagtctgttgctgaatgtgactataggtatataatccagttccagatacaggat
catactggcttaacatgggtaaatgcatttcaggagtgtggtgaggagatcctgggcatt
tctgcaaaagatttgtactacttgaaatatgttgatcaaaatgaagagaaattttcagaa
accttacggaatgctaccttttcaaaatatatattcaagttgaaagtaaaggaggaaaca
ttcggtgatgaacaacgtgtaaagtcaacagtagtcaaggtggaaaagtataatcattca
tctgataccaggtttcttttggatatgatggataagcttaaatcaggagatttaagttct
tatacctcaaaggcagaaagttcagttcctaattctggaatgagtaatagaggagctggg
agtatcggaaacagacaacctgcaccagcatttgcaaactatgtggggactaacagcaat
gctagtagagatttcgggttaatggccaatcaaatggggcagtatggaaaccagtacagt
ggttcaaggcttgctgttgccggcactcccatgcaggaatgctgtagcagttgcggggct
gctggtcatagctctgcaaattgcccgagcattatgagtgggcctggacagtccatggca
ggaggctattccaacagagtatcccctggagtaggcggtggagtaggcggtggtgcatct
ggtgagtgttataaatgccacaaattcggacattgggcaaaagactgtcctggacggaat
acagctcctccagcttatggaagcagcggcattggcatttcccctgggagatatgggaat
gccccaaggcaacaagttggtggcttttga
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integrated database retrieval system
