Pistacia vera (pistachio): 116126582
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Entry
116126582 CDS
T07386
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116126582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116126582
03110 Chaperones and folding catalysts [BR:
pvy03110
]
116126582
03029 Mitochondrial biogenesis [BR:
pvy03029
]
116126582
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvy04147
]
116126582
Enzymes [BR:
pvy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
116126582
Messenger RNA biogenesis [BR:
pvy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
116126582
Chaperones and folding catalysts [BR:
pvy03110
]
Heat shock proteins
HSP60 / Chaperonin
116126582
Mitochondrial biogenesis [BR:
pvy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
116126582
Exosome [BR:
pvy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116126582
Exosomal proteins of other body fluids (saliva and urine)
116126582
Exosomal proteins of breast cancer cells
116126582
Exosomal proteins of colorectal cancer cells
116126582
Exosomal proteins of bladder cancer cells
116126582
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
116126582
NCBI-ProteinID:
XP_031268116
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MALSFHSPAVFPSIAFFRRNFDGKKSVSGELLWRNQSQKMMRKMVVRAGVKKILYGKECR
ESLQAGIDKLADAVSLTIGPKGRNVILSESGALKVINDGVTIARAIELSDTIENAGAMLM
QEVASKTNDLAGDGTTTAVIVAREMIKSGLLAVSFGANPISMKKGMDKTVKELVKVLKNK
SFPVKGRDDIKAVASISAGNDEFVGNLIAEAIEKIGPDGVISMESSSTFETSVIVEEGMK
IDKGYMSPHFITNQDKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQLSVPLLIIAEDI
SRQVLETLVVNKMRGLLNVAVVKCPGFGEGKKALLQDIALMTGADFLSGDLGLTLEGATS
DQLGIARKVTITSNSTTIVADHSTKAEIQARILQIKKDLAETDSSYLSRKLSERIAKLSG
GVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEGIVPGGGATYVHLSNQIPMIKNSME
DPDEQIGADVVAKALIVPAMSIATNAGVDGTIVVEKTRTCDWRIGYNAMTGRYEDLLDAG
VVDPCRVSRCALQNAVSIASVVLTTQAVLVEKTKKPKPPVPHVPGISP
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggctctctcctttcattcgccagcagtctttccttcaatagctttcttcaggaggaat
tttgatggcaagaagagcgtgagtggtgaattgttatggaggaaccagtctcagaagatg
atgaggaaaatggtggtgagagctggggtaaagaagatattgtatggcaaagaatgtaga
gagtctttacaagctggaattgataagcttgctgatgctgtttctctcactataggccct
aaaggaagaaatgttatactttctgagtccggggcactgaaagtaattaatgatggagtt
acaattgcccgagccatagaactttcagatacaatcgagaatgctggagcaatgctaatg
caagaggttgcaagtaaaacgaatgatttggctggtgatggtaccacaactgcagtaata
gtggctcgagaaatgatcaaatctgggttgttggcagtttcttttggagctaaccccatt
tctatgaagaaaggaatggataagactgttaaagaattggtcaaggttttgaagaataaa
agttttcctgtaaaaggaagggatgatataaaagctgttgcttcaatctctgctggaaat
gatgagtttgttggtaacttgattgctgaagctatagagaagattggccctgacggagtg
atttctatggaatcatcctcgacatttgagacctcagtgatagttgaagaaggaatgaag
attgataagggttatatgtcaccccatttcatcacaaaccaggataaatctcttgtggag
tttgacaatgctaaagtcctgataactgatcaaaaaatttcaactgtgaaagaaatagtt
cctttactagaaaagaccacccaattgagtgtcccacttctaatcattgctgaagatatc
tcaaggcaagtgctggaaacactagtggtgaacaaaatgcgaggtttacttaatgttgct
gtagtcaaatgtccaggatttggagagggaaagaaagctctgttgcaagatattgccctt
atgacaggtgccgattttctttctggagatttgggcctgacccttgaaggtgcaacctct
gatcagcttggcattgcaagaaaagtaaccataacaagtaattcaacaaccattgtagct
gaccattctacaaaagctgaaattcaggcaagaattttgcagataaagaaggacctagct
gaaacagatagttcatatctgtcaagaaagctctcagaaagaatcgctaagctctctgga
ggtgtggctgtaattaaggtaggagcacacactgaggtggaacttgaagatcgaaaactc
agaattgaggatgcaaagaatgcaacatttgctgccatggatgaaggcatagtgcctggt
ggtggtgcgacatatgtacatttatccaaccagattcctatgataaaaaattctatggaa
gatccagatgaacagattggtgctgatgttgtagcaaaggcacttattgtacctgcaatg
tcaatcgcaactaatgcaggagttgatggaacaattgttgtggagaagactcgaacttgt
gattggcgaattgggtacaatgcaatgacaggaagatatgaagatcttctggatgccgga
gtagtagatccttgtcgggtttcaagatgtgcacttcaaaatgcagtttccatcgcatca
gtagtccttacaactcaagctgtgttggtagagaaaacaaagaagccaaagccacctgtt
cctcatgttccagggattagtccttag
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