Pistacia vera (pistachio): 116126628
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Entry
116126628 CDS
T07386
Name
(RefSeq) terminal nucleotidyltransferase 4B-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116126628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116126628
03016 Transfer RNA biogenesis [BR:
pvy03016
]
116126628
Enzymes [BR:
pvy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
116126628
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
116126628
Transfer RNA biogenesis [BR:
pvy03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
116126628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTPAP-like_central
NTP_transf_2
PAP_assoc
PAP_NTPase
TUTase
Polbeta
Nrap_D2
DNA_pol_B_palm
Motif
Other DBs
NCBI-GeneID:
116126628
NCBI-ProteinID:
XP_031268169
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MEQQPENILYETLSPLPLSTLSDVPSRPQSPPLDQLEPYTVFRNEISLSDLGGGYVESPA
PDFFSLDVNSSGVDELEEAEPKWQKEPKTPTKELEPRLESGWFRGNSSFKSPMLQLHKEI
VDFCDFLSPTPEEQALRNSAVESVFDVIKYIWPKCKPEVFGSFRTGLYLPTSDIDVVILG
SGIRNPPTGLQALSRALSQRGIAKKIQVIAKARVPIIKFVEKKSGFSFDISFDAQNGPKA
AEFIKDALYKWPQLRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAVLKSLYECQTS
PEHNLGVLLVHFFDIYGRKLNTTDVGVSCKGNGTFFKKSSKGY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacaacccgagaacatcctctacgaaaccctaagccctctccctctctctacg
ctttccgatgtcccctcacgccctcaatctccgccgttggatcaattggaaccctacact
gtgtttcgcaacgagatttcgttatctgatcttggtggcgggtacgtggaatctcccgcg
cctgattttttctcgctggatgtgaatagtagtggagttgatgaattggaggaagccgag
ccgaagtggcaaaaggagccgaagacgccgactaaggaacttgagccgaggttggagagt
ggctggttcagaggcaatagtagctttaagagtccgatgcttcagttacataaagagatt
gtggatttctgtgattttctatctccaactccagaagaacaagctcttcgcaactctgca
gtagaatctgtttttgatgttattaaatacatatggcccaagtgcaagcctgaggttttt
ggttcattcaggacagggctttatcttccaactagtgatatcgatgttgtgattctgggg
tctggtatcagaaacccaccaactggtttgcaggctctttctagggcattatctcaacga
ggtattgccaaaaagatacaggtgattgcaaaggctcgtgtgcccatcattaaatttgta
gagaaaaaaagcggtttttcatttgatataagttttgatgctcaaaatggaccaaaagca
gctgagtttatcaaggatgcattatataagtggcctcaattacgtccattatgtttgatc
ttgaaagtttttttacagcagagggaactgaatgaggtatattctggtgggattggttca
tatgctctccttaccatgttaatggcagtgttgaagagtctttatgagtgtcaaacttct
ccagagcataatttgggagtccttttggtacacttctttgatatttatggacgcaaattg
aacaccacagatgttggtgtatcttgcaaagggaacggcaccttctttaagaagagtagc
aaagggtattaa
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