KEGG   Pistacia vera (pistachio): 116126792
Entry
116126792         CDS       T07386                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
pvy  Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pvy04812]
    116126792
Cytoskeleton proteins [BR:pvy04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     116126792
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_SPT8 WDR90_beta-prop_4th eIF2A Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_IP5PC_F Beta-prop_RIG_1st Beta-prop_VPS8 Beta-prop_WDR19_1st PROPPIN VPS8_N PAN2_N
Other DBs
NCBI-GeneID: 116126792
NCBI-ProteinID: XP_031268331
LinkDB
Position
Unknown
AA seq 841 aa
MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS
GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
FKCHEGQVQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETTGVRCLTFNPDGR
TLLCGLHESLKVFSWEPIMCHDGVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR
IEPYAVGSVTRSNGHSESKSSSGGNFSVLNENTGKASLGRLSVSQNSDPLVKETKSLGRL
SVSQNSDPNTGKASLGRLSVSQNSDPLVKETKSLGRLSVSQNSDPVKESKFLSSTGSVPG
TPQRVNLNTGPKTSIASSVTAPSATVSKRNSTKVNSTSNVSILNKSDIVPVIVPRTNTRF
EQAAESRKEVDIVGRTMPFSLQSKTADFRKFPNSGDEVDRPTLPVLSETTGPKASELSSV
ADRNTYPAVKGSVQGASAAERNMKDDRFVISGKSESMSMSESPASYHDERYDSLGNKSTR
DAFPMESQKRGRMRSLVINWETRGRSPNFEGPTSGISQGTVSTGSMPPFNALKQRGYTAP
VEKEMVYASDEDASADVMEPHDQFVSSMQSRLAKLQVVSRYWERNDFKGAISAMQKMADD
AVLADVMSIMTEKIDIVTLDICSCLLPLLSGLLESDMDRHLSISLDMLLKLVRIFGSMIY
STLSASTSVGVDIEAEQRMERCNLCFIELEKVKRCLPILTRRGGSVAKSAQELSLALQEV
S
NT seq 2526 nt   +upstreamnt  +downstreamnt
atgactaccaaacgcgcttacaagctacaggaatttgtagcacattcttctacagtcaat
tgtctcaagattggaaggaagtcatcgagggttttggtcactggaggtgaagatcacaag
gtcaatctctgggccattggtaaacccaatgccattctgagtctgtctggacatacaagt
ggaatcgattctgtaagctttgattcttcagaagttttagtagctgctggagcggcaagt
ggtacaatcaagctttgggatttagaagaggcaaagattgttcgcacacttactggtcac
agatccaactgcatatctgtggacttccatccatttggggaattctttgcatctggctct
cttgacacaaatcttaagatatgggatatcagaaagaagggatgtatccacacgtacaag
ggccatacccgaggggtgaatgccatcagatttactccagatggtcgttgggttgtatct
ggaggagaggacaataccgtgaagctgtgggatctcactgctggaaagctgttgcatgac
ttcaaatgtcatgaaggtcaggttcagtgtattgattttcatcctcatgaatttctgctg
gcaacaggttcagctgataggactgtgaaattttgggaccttgaaacatttgagctaatt
ggttcaggtggccctgagaccactggagtgcgctgcttgacctttaatccagatgggagg
accttactttgtggattgcatgaaagtttgaaggttttctcctgggaaccaataatgtgt
catgatggtgtggatgtgggatggtcaagattgtcagatcttaatgttcatgagggcaaa
ctcctcggctgctcatataatcaaagttgtgtgggagtgtgggttgtagacatctcgcgc
atagagccatatgctgttggcagtgttacccgatcaaatggccattcagaatctaaatct
agttcaggtgggaatttctcagttctaaatgagaacactggaaaggctagtttgggaagg
ttatctgtttcacaaaattcagatcccttggtgaaggaaacaaaatctcttggaaggttg
tctgtttctcaaaattcagatcctaacactggaaaggctagtttgggaaggttatctgtt
tcacaaaattcagatcccttggtgaaggaaacaaaatctcttggaaggttgtctgtttct
caaaattcagatcctgttaaggagtcaaaatttttgtcatccacaggaagtgtacctggt
acccctcaaagggtcaatttaaacacaggtccaaagacaagtatagccagttctgtgaca
gctcctagtgcaacagtctcaaagaggaattctacaaaggtcaactcaacatccaacgtt
tcaatcttgaacaagtcagatattgtacctgtaattgtccctagaacaaatactaggttt
gagcaagcagctgaatccagaaaagaagttgacattgttggaagaacaatgccattttct
ttgcaatctaagacagctgatttccggaagtttccaaatagtggagatgaggttgaccgg
ccaactctccctgttctctctgaaaccacaggccctaaggcttctgaattgagtagtgtt
gcagataggaatacctaccctgcagttaaaggctcagtccagggagcatctgctgctgaa
aggaacatgaaggatgataggtttgtcatatctggtaagagtgaatcaatgtcaatgtcg
gagtctcctgctagctaccacgatgaaagatatgatagtttgggcaataaatcaaccaga
gatgcttttccaatggaaagtcaaaaaagaggaagaatgcgttcacttgtcataaattgg
gagacaagaggaagatctcctaattttgagggaccgacttccggtatttcccaagggaca
gtatctactggaagcatgcctccgttcaatgcgcttaaacagagaggatatactgcacct
gtcgaaaaagaaatggtttatgctagcgatgaggatgctagtgcagatgtaatggaacca
catgatcagtttgtcagctctatgcagtcccgtttggctaagttacaggtagtttctaga
tactgggaaaggaacgattttaagggggccattagtgctatgcaaaagatggctgatgat
gctgtccttgctgatgtaatgagcattatgacagagaaaattgacatagtgacgttggat
atttgcagttgtcttctccctcttctgtcaggtcttcttgaaagtgacatggataggcat
ttaagcatctctctggacatgctgcttaaacttgttagaatatttggctcgatgatctat
tcaacattgtcagcatcaacgtctgttggcgtcgatattgaggctgagcaaaggatggaa
cgctgcaacctttgctttatagagctggaaaaagtcaagcgctgcttgccgattctgact
agaagagggggttctgtcgcaaaatctgctcaagaattgagtttagcactccaagaagtt
tcatga

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