Pistacia vera (pistachio): 116127260
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Entry
116127260 CDS
T07386
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03040
Spliceosome
pvy04141
Protein processing in endoplasmic reticulum
pvy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116127260
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116127260
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116127260
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvy01009
]
116127260
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvy03041
]
116127260
03009 Ribosome biogenesis [BR:
pvy03009
]
116127260
03110 Chaperones and folding catalysts [BR:
pvy03110
]
116127260
04131 Membrane trafficking [BR:
pvy04131
]
116127260
03051 Proteasome [BR:
pvy03051
]
116127260
03029 Mitochondrial biogenesis [BR:
pvy03029
]
116127260
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvy04147
]
116127260
Protein phosphatases and associated proteins [BR:
pvy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
116127260
Spliceosome [BR:
pvy03041
]
Complex B
Other components
Prp19 complex
116127260
Complex C
Prp19-CDC5 complex
116127260
Ribosome biogenesis [BR:
pvy03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
116127260
Chaperones and folding catalysts [BR:
pvy03110
]
Heat shock proteins
HSP70 / DNAK
116127260
Membrane trafficking [BR:
pvy04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
116127260
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
116127260
Proteasome [BR:
pvy03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
116127260
Mitochondrial biogenesis [BR:
pvy03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
116127260
Exosome [BR:
pvy04147
]
Exosomal proteins
Proteins found in most exosomes
116127260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
SHE3
DNA_primase_lrg
Motif
Other DBs
NCBI-GeneID:
116127260
NCBI-ProteinID:
XP_031268767
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MAAKEEGPAIGIDLGTTYSCVAMWKNDRVEIIANDQGSRTTPSYVAFTDKERFIGDAAKN
QVDMNSKNTVYDAKRLIGRRFNDESVQRDMKLWPFKVVDGDGGKPMIVIKSKGEEKQLAP
ELVSSMILSKMRQIAEDFHGSTVKNAVITVPAYFNDSQRQATKDAGEIAGLNVMKIINEP
TAAAIAYGLDKKNSGAGERNVLIFDLGGGTFDVSLLTIDKDTFQVKAIAGDTHLGGEDFD
NNLVDHFVKEFRQKYKKDVSQKPRALQRLRSACERAKRTLSFTSQTSIHVDFLFQGIDFH
SNISRTKFEELNMDLFSKCITQVDNCLSDVKMDNNSVHDIVLVGGSTRIPKVQQLLQDFF
NGKNLCKNINPDESVAYGAAIQAALLSGQGNETMQGLVLTDVTPLSLGVEVGGCIMSVLI
PRNTTIPTKKEKVFSTCADFQSVVRIDVYEGERARTMDNNFLGRVSLFGILPAPRGFPQI
NVCFEIDENGILNVSAEDKTTGMTIKITITIDKGRMSRDEIEKMVKEAEKYEAEDKEYKK
KVEAKLSLEGYVSHMRHIVKSEKITSKLPAGKKKKILGDINRVIEWLNERDEVVEANIYE
DKKQELEIICRPVFEILSEDDGDIEVGIDDEAFLSYAMGGVKIEDVD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaggaagagggacctgcaatcggaattgatctagggactacatactcatgc
gtggctatgtggaagaatgacagagtggagatcatagccaatgatcaaggcagcaggacg
acgccgtcttatgtggcgtttactgataaggagcgttttattggtgacgctgcaaagaac
caggttgacatgaactccaagaacaccgtttatgatgcaaagaggttgatcggtagaaga
ttcaacgatgaatcagtccagagagatatgaagttatggcctttcaaggtcgttgatgga
gatggtggaaagccaatgattgtgatcaaaagcaagggggaagagaagcagttggctcct
gaattagtttcttccatgatactttccaaaatgcgtcagattgccgaagattttcatggt
tcaacggtgaagaatgcagttatcacggttcctgcctatttcaatgactcccagcgtcaa
gccaccaaggatgctggtgaaattgctggactaaatgttatgaaaatcatcaatgaaccc
actgctgcagccattgcttatggtctcgacaagaagaattccggtgccggtgaaagaaat
gttttgattttcgatcttgggggcggtacttttgatgtgtctttgcttaccattgataaa
gatacctttcaagtgaaggccattgctggagacacccatctcggtggtgaggattttgat
aacaacctggtagatcactttgttaaggagttcaggcagaagtataagaaagacgtcagt
caaaaacctagagctctccagagactgagatctgcgtgcgagagggccaagaggactctt
tcattcacttctcaaacttcaattcatgttgattttttgtttcagggaattgatttccat
tcaaatattagccgtaccaaatttgaggagctcaacatggatctcttcagcaagtgtatt
actcaggttgataattgtttgagtgatgttaagatggacaataatagtgtccatgatata
gtccttgttggtggttcaaccaggattccgaaagtgcagcagctattgcaggacttcttc
aatggaaaaaacctttgtaaaaacattaacccagatgaatctgttgcttacggtgctgca
attcaggctgccctattgagtggtcagggtaatgagactatgcagggactcgtcctcacg
gacgttacccctctttctcttggagttgaagttggaggttgtatcatgtctgttctaatc
ccaaggaacactacaatccccacaaagaaagaaaaggtgttctcaacatgcgcagatttt
caatctgtagtcaggatcgacgtttatgagggtgagagagcaagaactatggataacaat
tttttgggaagagtcagtctcttcggtattctacccgctccaaggggttttcctcagatc
aatgtctgcttcgaaattgatgaaaatggaatcctgaatgtctcagctgaggacaagacc
actggcatgacgatcaagattacaatcaccattgataagggaaggatgtctagggatgaa
attgagaagatggttaaggaggcagagaagtacgaggctgaagataaagagtataaaaag
aaagttgaggccaagctttctttggagggttatgtcagccatatgaggcacattgtcaag
tctgagaagataacatctaagctccctgctggtaagaagaagaagattttgggtgatatt
aatcgtgtcattgagtggcttaatgaaagagacgaagttgttgaggcaaacatttacgag
gacaagaagcaggagcttgaaataatttgccgcccagtttttgaaattctttcggaagac
gatggtgacattgaagttggcattgatgatgaagctttcctgagctatgccatgggtggt
gtcaagatcgaggatgttgactaa
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