KEGG   Pistacia vera (pistachio): 116127939
Entry
116127939         CDS       T07386                                 
Name
(RefSeq) cyclin-H1-1 isoform X1
  KO
K06634  cyclin H
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03022  Basal transcription factors
pvy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    116127939
  09124 Replication and repair
   03420 Nucleotide excision repair
    116127939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvy03021]
    116127939
   03400 DNA repair and recombination proteins [BR:pvy03400]
    116127939
Transcription machinery [BR:pvy03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     116127939
DNA repair and recombination proteins [BR:pvy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     116127939
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB RB_B
Other DBs
NCBI-GeneID: 116127939
NCBI-ProteinID: XP_031269454
LinkDB
Position
Unknown
AA seq 300 aa
MSDFQTSTHRARWIFTPQELVEKYKASNQRAIQTLEKYGTTQMEVDIDGSFSFPEPQKDN
AEKHSRSKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLHWSVMEHH
PKNIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQGLEFDLIVYAPYRPL
EGFVNDMEEFCPETNGHTPKDLHESAKLEVDRIMLTDAPLLYPPGQLALAALRRANNVHG
VLDFERYIESVLSRQNSTHTYPELVEYLNAIDSWVMKYKFPSEKDMKHINRKLKSCWGHG
NT seq 903 nt   +upstreamnt  +downstreamnt
atgtccgattttcagacctcaactcaccgagccaggtggattttcactcctcaagaactt
gttgaaaaatacaaagcttctaatcagagagcaatacaaactttggagaagtatggaaca
acgcaaatggaagtagatattgatgggtcattttcgttccctgaacctcaaaaagataat
gctgaaaagcattctcgttcaaaacccctcaatatcgaagaagaacagtctatgcgtgta
ttttatgaaaataaacttcgagaagtatgcagtgcattttacttccctaataaaattcag
gcaacagctctcttatacttcaaaagattctacctgcattggtcggtcatggagcatcac
ccaaaaaatataatgttaacatgtgtatatgctgcttgtaagatagaagaaaatcatgta
tcagcagaggagcttgggaagggcatctcacaggatcatcaaatgattctcaactatgaa
atgattgtttatcagggtttggaatttgatcttattgtttatgctccataccggccactt
gaaggttttgtcaatgatatggaggaattctgtccggaaacaaatggccatacgccgaag
gacttgcatgaatctgcaaagttggaagttgacagaatcatgcttactgatgcaccgctt
ttgtacccccctgggcagttggcattggctgctttgcgccgtgcgaacaatgttcatgga
gttctcgactttgagagatatatagaaagtgttctctctcgacagaattctacacacacc
tatccagagctcgttgaatatctaaatgccatagattcttgggtaatgaaatataagttc
ccttcagaaaaggatatgaagcacatcaaccggaaactaaaatcttgttggggccatggc
taa

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