Pistacia vera (pistachio): 116128202
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Entry
116128202 CDS
T07386
Name
(RefSeq) LOW QUALITY PROTEIN: tRNAse Z TRZ4, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvy03016
]
116128202
Enzymes [BR:
pvy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
116128202
Transfer RNA biogenesis [BR:
pvy03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
116128202
Prokaryotic type
116128202
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
116128202
NCBI-ProteinID:
XP_031269756
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MSVIYVCELPELMGKFDPKKAVALSLKPGPKFSELQSGKSVKSDSXDIMVHPSDVMGPSV
PGPIVLLVDCPTEAHVLELLSVESLSSYSADCSQECAKTVNFIIHLTPTSVTATPNYLKW
MKRFGSAKHIMAGHEMKNVEIPILKSSARIASRLNYLCPQLFPAXGFWSLQHLNNSTTKS
SASKGPDSMPSESISAENLLKFTLRPHAQLGFDRTNIPSLVAPSQIMDDLLSEIPEIVDA
AQHVSQFWQEHTGTKEAISPVQENELMIEEPWLDENRLPSCLENVRKDDLEIVLLGTGSS
QPFKYRNVSSIYINLFSKGSLLLDCGEGTLGQLKRRYGVEVADNAVRNLSCIWICHIHAD
HHAGLARILALRRDLLKGVSHESLLVVGPAQPKRFLNAYQRLEDLDMQFLNCRYTTEASW
NDFECNGESNKDPSTQGSTDNNENLNHKNVIHTELNLFAKGSCMQSFWKRPGSPVDSSTA
FPLLKSLKKVLGEAVLETLVSFPVVHCLQAFGIVLKAAERLSSVGNLIPGWKIVYSGDTR
PCQELIXASCGATDLIHEATFEDGMVEEALAKNHSTTKEAIEVGSGAYRIVLTHFSQRYP
KIPVVDEAHTHKTCIDFDLMSINLVDLPVLPKVLPYFKLLFKDEIPIDESDDVIDTVRVA
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttatatatgtttgtgaattgcctgaactcatgggaaaatttgatccaaaaaag
gctgtggctctcagcttgaaacctgggccaaaatttagtgaactgcaatctgggaagtct
gtgaagtcggatagctaagacatcatggttcatccaagtgatgtaatgggcccatctgtt
cctggtcccattgtactcctcgttgattgcccaacagaagcccatgtactggagttgttg
tctgtggaatctctcagtagttactctgcagattgctcacaagaatgtgccaagactgtg
aattttatcattcatttaactcctacttctgtcacagccactcccaattacctgaaatgg
atgaagagatttggttcagcaaaacatattatggctggacatgaaatgaagaatgtggag
attccaattctgaaatccagtgcaagaatagcatcacgacttaattacctgtgcccacaa
ttatttccagcttaaggtttttggtctcttcagcaccttaataattccacaacaaaatct
agtgctagcaagggtcctgattcaatgccttctgaaagtatttctgctgaaaatctcctt
aagttcactctgcgtcctcatgctcaacttggatttgatagaacaaatatcccgagtctg
gtggctccctctcaaataatggatgatttactttctgagattccagagattgtcgatgct
gcacaacatgtcagccaattctggcaagagcatacagggacaaaagaggcaatatctcct
gtgcaggaaaacgaactgatgattgaggagccatggttggatgagaatagacttcctagt
tgtttggaaaatgtaaggaaggatgacctggagattgttcttctggggactggttcatcc
cagccttttaaataccggaacgttagttctatctatattaatcttttttctaaaggaagc
ttgctcttagattgtggggaaggaaccctgggacagctgaaaagaagatatggtgtagag
gttgctgacaatgctgtgaggaatttgagttgtatttggatttgtcatattcatgctgat
caccatgccggtttggcaagaattcttgctctaagacgtgatctgttgaaaggagtgtct
catgaatcattgcttgttgtaggcccagcacaaccaaagagatttttaaatgcatatcaa
agacttgaagatctagatatgcaattccttaactgtaggtacactacagaagcttcatgg
aatgattttgaatgcaatggtgaatcaaataaggatccctcaactcaaggaagtactgat
aataatgagaatttgaaccataaaaatgtgatccatactgaattaaatctgtttgctaaa
ggaagctgtatgcaaagtttttggaagagaccaggaagtccagttgatagcagcactgct
tttccattgctgaagagcctgaagaaagtgctcggtgaagcagtgctggagacgttggtt
agttttcctgttgtgcactgcctccaggcatttggtattgttttgaaggcagcagaaaga
ttatctagtgtgggaaacttaatacctgggtggaagatagtatattcaggcgacaccagg
ccttgccaggagttaatttaagcatcctgtggagcgacagatcttatacatgaggcaacc
tttgaggatggtatggtggaggaagctttggcaaaaaaccacagcacaacaaaagaagcc
attgaagtcggttcaggtgcttatcggattgttctcacacacttcagccaaagataccct
aagattcctgtggttgatgaggcacacacgcataaaacgtgcatagattttgatttgatg
agtattaacctagtagatttacctgtgctccctaaagttcttccctactttaaattgctt
tttaaagatgagataccaattgatgagtcagatgatgttattgacactgtacgtgtagct
tcttga
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