Pistacia vera (pistachio): 116128246
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Entry
116128246 CDS
T07386
Name
(RefSeq) tRNAse Z TRZ4, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvy03016
]
116128246
Enzymes [BR:
pvy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
116128246
Transfer RNA biogenesis [BR:
pvy03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
116128246
Prokaryotic type
116128246
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
116128246
NCBI-ProteinID:
XP_031269827
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MQESKNESSFRFNKRRFEGKSCIDMPNKNPQHKVPKLNPTTTVSYVQILGTGMDTQDTSP
SVLLFVDEQRFIFNAGEGLQRFCTGHKIILPNVDHIFLSRVCSETAGGLPGLLFTLADFG
GLSVNVWGPSDLKYLVDAMKSFIRRDAMVHARSFGTSPSSDATLTDLTKLTDPLVLVNNE
VVKISAILLKPNFSGGSAVKPGELSVIYVCELPELMGKFDPDKARALGLSSGPKYDDLKS
GKSVQSDCGTMVHPSDVMGPSVPGPIVLLVDCPTEAHVLELLSVESLSSYYADCSSKCAK
TVNCIIHLSPTSVTGTPNYQICMKRFGSAQHIMAGHEMKNAEVPILKSNARLSARLNYLC
PQLFPAAEFCSLQHLNNSAPDYSASEGPVARLSESVSAKNLLKFTLLPHAHLGLDRTEIP
CLVALSELMDELHSEIPEIVDAAQHVSQIWQEPPETKEVISHVHENEVDENRLPSCLENV
RKDDLEIVLLGTGSARPCEYRNVSSIYINLFSKGSLLLDCGEGTLGQLKRRYGIEGADSA
VRNLRCIWISHIHADHQAGLARILALRHDLLKGVSHEPLLVVGPAQLKEFLDAYQRLEDL
DMQFINCRYTTESSWIDFEHNIELHKDPLAQGSTNNNEDLNHKNALHSELNLSDNSTAFP
SLESLKKVLHEAGLETLISIPVVHCQEAFGIVLKASERINGAGKVIPGWKIVYSGDTRPC
ATLAEASCGATVLIHEATYEDGQVEDAVAKKHSTTKEAIEVGSGAYRIVLTHLRQRHPKI
PAVDDAAMHKTCIAFDLMSINLADLPVLPKVLPYLKLLCKDESDGVS
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagagtaaaaatgagtcctcttttaggttcaacaaaagaaggtttgagggaaaa
agttgtattgatatgccaaataagaatcctcagcataaagttcccaagcttaacccaact
actactgtttcatatgtccagattctggggactggaatggatactcaggacacttcgcct
tcagtcctactcttcgttgacgagcaaagatttatttttaatgctggagagggattgcaa
cgattctgtaccgggcataagattatattaccaaacgtagatcacatatttctttctcgt
gtctgctccgagacagcagggggacttccaggtcttcttttcactttggccgattttgga
gggctgtctgtaaatgtatggggtccttcagacctcaagtatttagttgatgcaatgaag
tctttcattcgacgtgatgctatggttcacgcacggagctttgggacatctccatcctct
gatgctactctaactgatttaacaaagttaaccgacccccttgttcttgtcaataatgag
gttgttaaaatatcagccattctcctaaaaccaaatttctctggaggatcagcagtaaag
cctggagagttgtctgttatatatgtttgtgaattgcctgaactcatgggaaaatttgat
cctgacaaagctagggctctaggcttgagttctgggccaaaatacgatgatctgaaatct
gggaagtcagtgcagtcagattgtggcaccatggttcatccaagtgatgtaatgggcccg
tctgttcctggtcccattgtgctactcgtcgactgcccaacagaagcccacgtattggag
ttgttgtctgtggaatctctcagtagttactatgcagattgctcatcaaaatgtgccaag
actgtgaattgtatcattcatttaagtcctacttctgtcacaggcacccctaattaccag
atatgcatgaagaggtttggttcagcccaacatattatggctggacatgaaatgaagaat
gcagaggttccaattctaaaatccaatgcaagattatcagcacgacttaattatctgtgt
ccacaattatttccagctgcagagttctgctctcttcagcatcttaataattccgcacca
gattatagtgctagcgagggtcctgttgcaaggctttctgaaagtgtttctgctaaaaat
ctactgaagttcactctgcttcctcatgctcatcttggacttgatagaacagagatccca
tgtctggtggctctctcagaattaatggatgagttacattcggaaattccagagattgta
gatgctgcgcaacatgtcagccagatctggcaagagcctccagaaacaaaagaggtgata
tctcatgtgcatgaaaatgaagtggatgagaatagacttcctagttgtttggagaatgta
aggaaagatgacctagagattgttcttctggggactggttcagcccgtccttgtgaatac
cggaatgttagttctatctatattaatcttttttccaaaggaagcttgctcttagattgt
ggggaaggaaccctgggacaactgaaaagaagatacggtatagagggtgctgacagtgct
gtgaggaatctaaggtgcatttggatttctcatattcatgctgatcaccaggctggtttg
gcaagaatacttgctctacgacatgacttgttgaaaggtgtgtctcatgaaccattgcta
gttgtaggcccagcacaacttaaggaatttctggatgcatatcaaagacttgaagattta
gatatgcagttcattaactgtagatacactacagaatcttcatggattgattttgagcac
aatattgaattgcataaggatcctttggctcagggaagtactaataataatgaggatttg
aaccataaaaatgcgctccattctgagttgaatctgtctgataactctaccgcttttcca
tcgctagagagcctaaagaaagtgcttcacgaagcagggttggagaccttgattagtatt
cctgttgtgcactgtcaagaggcatttggtattgttttgaaggcatctgaaagaattaat
ggtgccggaaaagtgatacccgggtggaagattgtatattcaggtgataccaggccctgc
gcgacgctagcagaagcatcctgtggagcgacagtccttatacacgaggcaacctatgag
gatggccaggtggaggatgctgtagctaaaaaacacagcacaacaaaggaagccattgaa
gtcgggtcaggtgcttatcggattgttctcacacacttacgccaaagacatccaaagatt
cctgcagttgatgatgcagctatgcataaaacatgcatagcctttgatttgatgagtatc
aatctagcagatttgcctgtgctccctaaagttcttccataccttaaattgctttgtaaa
gatgagtcagatggtgtttcttaa
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