Pistacia vera (pistachio): 116128536
Help
Entry
116128536 CDS
T07386
Name
(RefSeq) LOW QUALITY PROTEIN: deoxyribodipyrimidine photo-lyase-like
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116128536
Enzymes [BR:
pvy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
116128536
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
116128536
Prokaryotic type
116128536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
116128536
NCBI-ProteinID:
XP_031270111
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MASLSPQSTSVHPGRIRVLKQGSPPALDQHAGPVVYWMFRDQRLRDNWALIHAVDQANKN
NVPVAVAFNLFDQFLGAKARQLGFMLKGLRHLQTSIEETFQIPFFLFQGEAEEAIPNFVK
ECGASLLVTDFTPLREIRRCKDKICKRVSDSVAIHEVDAHNVVPVWVASEKLEYSAKTLR
GKINKLLSGVPHXFTVLQSPHRKWAATRRSIDWDSVIADVLRKGAEVPEIDWCQPGEDAA
MEVLKGSNDGFXQRLKGYPKDRITLKPRALSCLSPYXHFGQISAQRCXLEARCARKLCPE
AIDAFLEELIVCRELADNFCFYQPHYDSLKGAWEWARKTLKDHASDKRELIYTKEQFEKA
QTADPLWNASQLEMVYHGKMHGFMRMYWAKKILEWTRGPEEALAISIYLNDKYEIDGRDP
NGYVGCMWSICGVHDQGWKERPIFGKVRYMNYAGCKRKFDVDGYISLVKRIAGQSKKRKA
ETLLSEKAKELHS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctatctccgcaatcgacctctgtccatccgggccgcattcgggttctaaaa
caaggttcaccaccagcgttagatcaacatgctggtccggttgtttactggatgttcaga
gatcaacggctgagagacaactgggctttgattcacgccgttgatcaagccaacaagaat
aacgtacctgtggctgtggcttttaatctttttgatcagttcttgggtgctaaagccagg
caactagggttcatgttaaaaggtttgcgtcatctgcagacaagtattgaagaaactttt
caaattccatttttcttgtttcagggagaagctgaagaggccatacccaattttgtgaaa
gaatgcggggcttcattgttagtaaccgattttacacctttaagggaaattcggagatgt
aaagataaaatatgcaagagggtgagtgattcagtagctatacatgaagttgatgcacat
aatgtagtacctgtttgggtagcatctgagaagttggagtacagtgcaaagaccttacgt
gggaagatcaataaattgctttctggagtacctcattgatttactgtgttgcaatctcca
catagaaaatgggctgctactagacggtcgattgattgggatagcgttattgctgatgtt
ttaaggaaaggggctgaagttcctgaaattgactggtgtcaacctggagaagatgcagca
atggaagtattgaagggaagtaatgatgggttttgacaaaggttgaagggctatcctaaa
gatagaataaccctgaaacccagagcactttcatgtctctctccatatnttcatttcggg
cagatatctgcacagagatgtngcttggaggcacgttgtgcaaggaaactttgtcctgag
gcaattgatgcatttttggaggagttgattgtgtgtagagaacttgccgataacttttgc
ttctaccagcctcattatgattcattgaagggggcgtgggaatgggctcgtaagaccttg
aaggaccatgcctctgataaacgagagcttatttacacaaaagagcaatttgagaaggca
cagactgctgatcctctttggaatgcttctcagttggagatggtttaccatgggaagatg
catggtttcatgcggatgtattgggcaaaaaagattcttgagtggacaagaggacctgaa
gaagcccttgcaatatcaatatatctaaatgacaagtatgaaatagatgggagggatcca
aatggatatgttggttgcatgtggtcaatatgtggtgttcatgatcaggggtggaaagag
cgacctatctttgggaaagtacgttatatgaactatgcagggtgcaagaggaaatttgat
gttgatggatacatttcccttgtcaagaggatagcaggccaatctaagaagagaaaagca
gaaacccttctcagtgaaaaagcgaaggaactccatagttaa
DBGET
integrated database retrieval system
