Pistacia vera (pistachio): 116128592
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Entry
116128592 CDS
T07386
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116128592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvy03021
]
116128592
03036 Chromosome and associated proteins [BR:
pvy03036
]
116128592
Transcription machinery [BR:
pvy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116128592
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116128592
PBAF complex
116128592
GBAF(ncBAF) complex
116128592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_1
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
116128592
NCBI-ProteinID:
XP_031270200
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MAAKESPGPSIPVTPPVVKSEIPPASDPDADVVHVPSYSRWFSWDSVNECEVKFLPEFFD
SRSPSKNPRVYKYYRNSIIMKFRENPSRKITFTDVRRTLVGDVGSIRRVFDFLETWGLIN
FLASVKPLKWEDKETKSAAPSVEFAALRKETSKRVCNGCKSLCTIACFACEKYELTLCAR
CYVRGNYRVGVSSSDFRRVEISEETRTEWTEKETLLLLEAVMQYGDDWKKVAQHVPGRCE
RDCIAHFIKLPFGEEFIGQPDSGEDDSKINHMNNSGDAESELLSDGTTSPSKKMRLTPLA
DASNPIMAQAAFLSALAGVEVAEAAARAAVTTQSEVDNRTSKPSLGSLVRNMKHQEAEVA
ANGDTTENVLERSSFDANSLIEKEQLDLEKAVTDIMETQMKEIQEKIVRFEKLDLQMEKE
WQQLEEMKNMLFVDQLSLLFHKTSAPKSGDHIEENVKIHIQ
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaatctcccggaccctccatccctgtcactcctccagtcgtcaagtcc
gagattcctcccgcttccgaccctgacgccgacgtcgtacacgtccccagctactccaga
tggttttcatgggactctgtcaatgaatgcgaggtgaaatttcttcctgaattctttgat
tcacgttccccttccaaaaaccctagagtttacaaatactataggaattctataatcatg
aaatttcgagaaaacccttcgaggaagatcactttcacagacgtcaggaggactcttgtg
ggtgacgtgggctccattcgaagagtatttgattttcttgagacttggggacttatcaat
ttcttggcttctgtcaagcccctcaagtgggaagataaagaaactaagtctgctgctcct
tccgttgaatttgctgctttacgtaaggagacttctaagagggtttgcaatggttgcaag
tctctttgtaccattgcttgttttgcttgtgaaaagtacgagttgacgctttgtgctaga
tgctatgttcgtgggaactatcgggtgggtgttagttcttcagactttaggcgggttgag
atcagtgaggagacaagaacagaatggacagagaaagagactttgctgcttctggaggct
gttatgcagtatggtgatgactggaagaaagttgcacaacatgttccgggtagatgtgag
agagattgcattgctcattttatcaagcttcctttcggggaggaatttattggtcagccg
gactcaggggaggatgatagcaaaattaatcatatgaataattctggcgatgccgaaagt
gaattgttaagtgatggcacaacatcccctagtaaaaaaatgcgcctcactcctcttgca
gatgcaagcaacccaatcatggctcaggctgcttttctatcggctttggctggtgttgag
gttgctgaagcagctgctcgagcagctgtgacaactcagtcagaggttgataacagaaca
agtaaaccgagtcttggctctcttgtcagaaacatgaaacatcaagaagctgaagttgca
gctaatggtgataccactgaaaatgtactggaaaggtcttcttttgatgcaaattccttg
atagagaaggagcagctggatctcgagaaagctgttactgatatcatggaaacacagatg
aaagaaatccaagagaagattgttcgttttgaaaagttggatctgcagatggagaaagaa
tggcaacagttggaggaaatgaagaatatgctttttgttgatcaactttctcttctgttt
cataaaacttctgctccaaaatcgggagatcacattgaggagaatgtcaaaattcatatt
caatag
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