KEGG   Pistacia vera (pistachio): 116129006
Entry
116129006         CDS       T07386                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03030  DNA replication
pvy03410  Base excision repair
pvy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    116129006
   03410 Base excision repair
    116129006
   03420 Nucleotide excision repair
    116129006
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvy03032]
    116129006
   03400 DNA repair and recombination proteins [BR:pvy03400]
    116129006
Enzymes [BR:pvy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     116129006
DNA replication proteins [BR:pvy03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    116129006
DNA repair and recombination proteins [BR:pvy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      116129006
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf_DPOE_2 zf-DPOE DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 116129006
NCBI-ProteinID: XP_031270603
LinkDB
Position
Unknown
AA seq 2208 aa
MDGRRWERRDPRLTKKQKLFRSAEEELESKLGYDLFSEGDKRLGWLLTFASSSCEDEDSH
KVYSCIDLYFVSQDGSTFKAKYKFRPYFYAATKDKLEMDVEAYLRRRYESQIADVEIVDK
EDLDLKNHLSGLHNFYLKISFDTVQQLMDVKRDLLRVVERNQAKFDAAEAYESILTGKRE
QRPQDFLDCIVDLREYDVPYHVRFAIDNDVRCGQWYDVSVSSTGVMLERRTDLLQRAEVR
VCAFDIETTKLPLKFPDAEYDSIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEG
CFKVTNVTNEVELLRQWFAHMQEVKPGIYVTYNGDFFDWPFVERRAAHHGFKMSDELGFQ
CDKIQGECRAKFACHLDCYAWVKRDSYLPQGSHGLKYVTKAKLGYQPLEVNPEDMVRFAK
EKPQMMASYSVSDAVATYFLYMTYVHPFIFSLATIIPMAPDEVLRKGSGTLCEMLLMVQA
YKANVICPNKHQSDSEKFYKNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPAAYEQL
INNLDRDLQYAIRVEHKTDLESVTNYEEVKNAIMEKLLRLRDEPVREECPLIYHLDVAAM
YPNIILTNRLQPPSIVTDEICTACDFNRPGKTCLRKLEWVWRGEIFMAKKSDYYHLKKQI
ESEFVDGTNGQSSKSFLDLPKTEQQSKLKERLKKYCQKAYKRVLDKPVTELREAGICMRE
NSFYVDTVRSFRDRRYEYKKLNKVWKGKLSEAKASGNSIKIVEAQDMVVLYDSLQLAHKC
ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPG
SFPENFTFKTKDLKKLTISYPCVMLNVDVARNNTNDQYQTLVDAVNKTYETHSECSIEFE
VDGPYKAMILPASKEEGILIKKRYAVFNHDGTLAELKGFEVKRRGELKLIKVFQGELFDK
FLHGSTLEECYFAVAAVANRWLDLLDNQGKDIADCELLDYISESSTMSKSLAEYGEQKSC
AVTTAKRLSDFLGDTMVKDKGLLCHYIVAFEPRGTPVSERAVPVAIFETNPEIMKYYLRK
WCKTSSDVGIRSIVDWSYYKQRLSSAVQKIITIPAAMQKVANPVPRVIHPDWLHKKVREK
EDKFRQRKLVDIFSAFNKDDLLMKTGDAFTNNHVMDENVEDLEDFRNKSSSVKECRPIVR
YYEVNNEQQAVKTNGEIYALQQKTDPSENLLKQSSSLQHNNENIDRNVDYQGWLESKKRK
WRDNLDRRKRQRLGSLRTSHHANGVSERLGGVTNRKEVQDRTGVGSYFRRHEVTLTQGHW
QIIQLVPSSENGVLFAWVVVEGIMFKIPINIQRVFYLNSKESITEKFPGRCVNKALPHGK
HSHNLIEVMIHEDLFRKESKKLAALLADPEVEGIYETKVPPEFNAILQIGCVCKADKSTR
KRNSQDGWSLNELHMKTTTECSYLEHSVSFFYLYHSISEGRAIYVGYFPTSRTVTVVVVS
PHQHRELSPSILEKQFREACRTLSTELPPGDRIVFKVDYVGSVKDAEKILQRAISENRHE
HYGPTIAVIECPNSQLLRSGIRVLDDFPCVSIPANARDSQYQVLGWQQNAAKIGMHRCAA
SAQWFNERISLAKYAHVPLGNFEPDWLMFTADVFFSRALRDQQQVLWISDDGIPDLGGTT
EEDTCFADEVHQPTLTYPGAYRKVAVELKIHHLSVNALLKSNQVNEMEGGGWLGFDQDMN
LRSHTDNGQCGFDESTASAPALRVLKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHS
KLHDPVLHRILHKVMQKVFALLLAEFRKLGATIIFANFSKVIIDTGKFDLSASKAYCDSL
LKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARTDEIVDDNSQVDIVSSWNIAEF
LPKDIQDHFVLVVSEFMYIPWKYAQKQAVSRASLRDGNLCTPSITVAAAETFESHMAEYL
KGEISSYFTGKILGIVRDSIHHMKRINRSESDKQNSHEVLQPAGSIHKVDAALEFIKHVC
AVFSLDQSVQHDVLVMRKNLLKYVRVKEFAPEAQFRDPCPSFILPNVICSYCNDCRDLDL
CRDLALQAQEWRCAMPQCGQPYDHEVMENALLQIVRQRERLYHLQDLVCMRCNQVKAAHL
AEQCACAGSFRCKEDVSDFRSKMQIFLSIAIRQKFQLLQECTSWILEV
NT seq 6627 nt   +upstreamnt  +downstreamnt
atggacggtcgaagatgggagcgtcgagaccctagactcaccaagaagcagaagttgttt
cgtagcgccgaagaggagcttgagtcaaagcttggctacgatctcttctcggaaggcgac
aagcgccttggttggctactcactttcgcttcttcatcttgtgaagatgaagacagccac
aaagtctacagttgcattgatctttattttgtttctcaggatggttctacttttaaggca
aagtacaagttccgtccttatttttatgcagcaacgaaggacaaattggaaatggatgtt
gaggcatatttgaggcgacgttatgaaagtcagattgctgatgttgaaattgtggataaa
gaggaccttgatctgaaaaatcatttgtctggattgcacaacttttatttaaaaatatct
tttgataccgttcaacaactaatggacgtgaagagagatctattgcgtgttgttgaaaga
aaccaggcaaagtttgatgctgcagaagcatatgagtccatactaacagggaaacgagag
caaagacctcaagacttccttgattgcattgttgatctccgtgagtatgatgttccttac
catgtccgctttgccattgacaatgatgtgagatgtggacagtggtatgatgtaagtgta
tctagtactggtgttatgcttgagaggaggactgatcttttgcagcgtgctgaagttcgt
gtttgtgcatttgatattgagaccacaaagcttcctttgaaatttccagatgcagaatat
gattccataatgatgatatcatacatgcttgatggacaaggctacttgattataaacaga
gagtgtgtcggggaggatatagaggatttagagtatactccaaaaccagaatttgaaggg
tgtttcaaggtgacaaatgtgacaaatgaggtagaacttcttaggcaatggtttgctcac
atgcaagaggtcaagcctggtatttatgttacatacaatggtgatttttttgattggcca
ttcgttgaaagaagagcagctcatcatgggtttaaaatgagtgatgagctaggatttcaa
tgcgacaaaattcagggggagtgtcgtgcaaaatttgcttgtcatttggattgttatgca
tgggtcaaacgtgatagttatctccctcaggggagccatggcctaaagtatgttacaaag
gcaaagttgggctatcaaccacttgaggtgaatccagaggatatggttcgctttgcgaaa
gaaaagcctcagatgatggcctcctattctgtttctgatgccgttgcaacttatttcctg
tatatgacctatgttcatcccttcattttctctcttgccactataattcccatggcaccg
gatgaggttttgcgcaaaggtagtgggaccctatgtgaaatgcttctaatggtccaggca
tacaaggcaaatgttatctgccctaacaagcatcaatctgactcggagaagttttataag
aaccaccttcttgagagcgaaacatatattggtggtcacgtggaatgccttgaaagtggt
gttttcagatctgaccttccaactagttttaagctcgatccggcagcctacgagcaatta
atcaataaccttgatcgagatttgcaatatgctataagggtagagcacaaaacggatctg
gaatcagtcaccaattatgaagaagtgaagaatgctataatggaaaagcttttgaggttg
cgagatgagcctgtacgtgaagaatgcccccttatttatcatctagatgttgctgcaatg
tatccaaacattattttaacaaatcggctccagccaccatccattgttacggacgagatc
tgcactgcatgtgatttcaaccgtccaggcaaaacttgtctccgaaagcttgaatgggtt
tggcgtggagagatatttatggcaaagaaaagtgattattatcatttgaagaagcaaatt
gagtctgagtttgttgatggcaccaatggtcagtcatcaaaatcctttctcgaccttcca
aagacggagcaacaatcaaagctcaaggagcgtctaaagaaatactgtcagaaggcatat
aaacgtgtacttgacaagccagtcactgaacttcgagaagcagggatctgcatgcgggaa
aattcattttatgttgacactgttcgcagctttcgtgatagaagatatgaatacaagaaa
cttaataaggtttggaaggggaagttgtcagaagcaaaggctagtggaaattccattaag
atcgtggaagcacaggacatggtagtgctttatgattccttacaacttgctcacaagtgt
atccttaattccttttatggatatgtcatgcgcaagggtgctagatggtattcaatggaa
atggctggtgtagttacatatactggtgcaaaaatcattcaaaatgctcgcttgcttatt
gaaaaaattggaaaaccacttgaattagacacagatggtatctggtgtgtacttcctgga
tcctttccagagaattttactttcaaaacaaaagacttgaagaaactgacaatctcatat
ccatgtgtaatgcttaatgttgatgttgcaagaaacaatacaaacgaccaataccagaca
cttgtagatgctgtcaacaaaacctatgaaactcatagtgaatgctcaattgagtttgaa
gtggatgggccatacaaggcaatgattcttcctgcctctaaggaagagggaattttaatt
aaaaagcgatatgctgtttttaatcacgatggaacccttgcggagctaaaaggttttgaa
gtaaagcgtagaggggagctgaagctcattaaagttttccagggtgaactttttgataag
ttccttcatgggtcaaccttagaggagtgctacttcgctgttgctgctgtggcgaaccgg
tggcttgatcttcttgataatcaaggaaaagatatcgcagattgtgagttgctggactac
atatcagaatcaagcacaatgagcaagtctttggcagaatatggtgaacaaaagtcgtgt
gcagtgaccacagcaaagcgtctttctgattttctgggtgatacaatggttaaagataaa
ggactcctttgccactatatagttgcatttgaaccaaggggaacacctgttagtgagcgt
gctgttcctgttgcaatatttgaaactaatcccgaaataatgaaatattatttacgcaag
tggtgcaaaacttcatcagacgttggcattcgatccattgttgactggtcttattacaaa
caacggcttagctcagcagttcaaaaaattattactattcctgctgcaatgcagaaggtt
gcaaatcctgttcctagggttattcatcctgattggttgcacaaaaaggttcgtgagaag
gaagataaatttcgtcaaaggaaattagttgacattttcagtgcattcaacaaagatgat
ttgttaatgaagactggtgatgcttttaccaataatcatgtgatggatgagaatgttgaa
gatctggaagactttcgaaacaagagtagttcagtaaaggaatgtaggccaattgtccgt
tattatgaagtcaataatgaacaacaggcagtcaagaccaatggggaaatatatgccttg
caacaaaaaactgatcctagtgaaaatttgcttaagcagtcctcatcattgcaacacaat
aatgaaaacattgacagaaatgtagattaccaaggatggcttgaatcaaagaagagaaaa
tggagagataatttggacaggaggaagaggcaaaggttgggcagtctaaggacctcacac
catgccaatggtgtttctgagcgactaggtggtgtgacaaaccgtaaagaggttcaggac
agaactggtgttggttcatattttaggaggcatgaagtaaccctaacacagggccattgg
cagattatacaactagttccaagttcagagaatggtgtacttttcgcttgggttgttgtt
gaaggaatcatgtttaagattcctataaacattcaacgggtattttatcttaactccaaa
gagtccattacagaaaagtttcctggaaggtgcgtcaacaaggctcttcctcatggaaag
catagccataacctaattgaggttatgattcatgaagatctatttaggaaagagagcaaa
aagcttgctgccctccttgcagatccagaagttgaggggatatatgaaacaaaggtgcca
ccagagtttaatgctatcctccagattggttgtgtatgtaaagcggataaatcgactagg
aaacgaaattcccaggatggttggagcctgaatgagctgcacatgaagactacaacagaa
tgttcttatctggagcattcggtctctttcttttacttgtatcatagcatatctgaagga
cgtgctatatatgttggatattttcctacatcaagaacagtaacagttgtggtggttagt
cctcatcaacatagagaattatcaccttccatccttgaaaaacaattccgtgaagcatgc
cgaactttgtccactgaattgcctcctggggatcgtattgtgttcaaggtggattacgtg
ggatctgtcaaggatgctgaaaagattttacaaagagcaataagtgaaaacagacatgaa
cattatggacctacgattgcagttattgaatgcccaaactctcaattattgaggtcaggt
atacgagttcttgatgatttcccttgtgtgagcattcctgctaatgctcgtgatagtcaa
tatcaggttcttggttggcaacaaaatgctgcgaaaattggaatgcatcgttgtgctgca
tcagctcagtggtttaatgaaagaatttctcttgcaaaatatgctcatgtaccattggga
aattttgaacctgactggcttatgtttactgctgatgtcttcttttccagagcattacgt
gatcagcagcaggtactttggatatcagatgatggcattccagatttaggaggcactact
gaagaagatacgtgttttgctgatgaggtccatcaacctactctaacatatcctggagca
tatagaaaagttgctgtggaactgaagattcatcatctatcagtcaatgcacttttgaaa
agcaaccaagtgaatgaaatggaaggaggtggttggttaggatttgaccaggatatgaat
ttgagatctcatactgataatggacagtgtgggtttgatgagagtactgcatctgcccca
gcacttcgtgtcctgaaacaacttatccagaggtgccttacagatgccgttacttcagga
aatgtgtttgctgatgccatattgcaacatctatatcgttggctttgcagcccccattca
aaacttcatgatccagtgcttcatcgcattcttcacaaggtcatgcaaaaggtgtttgcg
ctgctgttggctgagtttcgcaaattaggtgccacaataatattcgcaaacttctcaaag
gtcattatagacactggaaaattcgatctatctgcatctaaagcttactgtgatagcttg
ctgaaagctctgcaaactagagaactatttgagtggattgagcttgaaccagtgcacttc
tggcattccttgctttttatggaccagtataactatggtggaatccctgctcgaactgat
gaaattgttgatgataactcacaagtggatattgtatcaagctggaatattgctgaattt
ttacccaaggacattcaagatcattttgttctagttgtctctgagtttatgtacatccct
tggaaatatgcacaaaagcaagctgtaagtagagcatctttgcgggatggcaacttatgc
actccatcaatcactgttgcagctgcagagacctttgagtcgcacatggcggaatatctg
aaaggcgagatcagctcttatttcacaggcaaaattctcgggattgttcgtgatagtatt
catcatatgaagaggataaacagatctgagagtgataaacaaaattcacacgaggttctg
caacctgctggtagtatccacaaagttgatgctgctttggagttcattaagcatgtctgt
gctgttttttccctcgaccaaagtgttcagcatgatgttctggtgatgagaaagaatctt
ttaaaatatgtgcgtgtgaaggagtttgctccagaagctcagtttcgtgatccctgccct
tccttcatcttaccaaatgtgatttgcagctattgcaatgactgtagagacttggatttg
tgtcgtgacttggctttacaggctcaggagtggcgttgtgccatgccgcagtgtggccag
ccttatgatcatgaggtgatggagaatgctcttctccaaattgtacgacagagagagcgg
ctctaccatctgcaggatctggtatgcatgaggtgcaaccaggtgaaagctgcacattta
gcagaacaatgtgcatgtgctggctcatttaggtgcaaggaagatgtgtctgatttccgt
agcaaaatgcagatcttcttaagcatagctattcgtcagaagtttcaactccttcaagaa
tgtacctcgtggattttggaagtttga

DBGET integrated database retrieval system