Pistacia vera (pistachio): 116129017
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Entry
116129017 CDS
T07386
Name
(RefSeq) transcription initiation factor TFIID subunit 4b
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116129017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvy03021
]
116129017
03036 Chromosome and associated proteins [BR:
pvy03036
]
116129017
Transcription machinery [BR:
pvy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116129017
Coactivators
SAGA/TFTC/STAGA complex
116129017
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116129017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
116129017
NCBI-ProteinID:
XP_031270611
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MDPIMKLLEEDEDESMHSGADVEAFQAALNRDIGGDASTSQPSDSDSALSQGKESNHASG
QPILQWQNVSQDDNKQFQYQHGLESVQQEEQPSSEVELKQLGSITENQQPQNDSSVSEEH
NRLLLQQKQSQDDSPQAPAEHTPTQVPQTASMQISEKNPIPAREPEKTHNQGSESQFSKI
QKMGNQQAVATEQASNPMNRGKQVPFALLLPALIPHLDKDRAMQLHTLYGKLKKNEILKD
IFVRHMRDIVGDQMLRLAVSKMQSQMGTKQFQLQSQASARQQHLRMPSPTAGATQFSDTH
SFAPLHHKGSNSTADPAHAPASTVQMQVGSTFAIKENNAQKPRELERQPGSHGIHASQMA
SSSPSTVNQERERSSVPVQGLNKQQQQHLHFPQTSFPMYGSGGGNYHPYSATNVNPPGSS
LKPHPHDSQMRQISHPQNMGSASSGGASQAMSTINVPKFERQNSINEPGKVQGGSISHFT
NSSTSQQNTVPWQPPTNKEHNSGPLSSMTYVKPEPVDQGIDQQHKSLPSTPKGLSVAPVE
QGNAVPGTMKDEAFEKQSPRIGFPTSTSMLPSNSVSPSTTTQQDPNVSLSSRIPSVTSPA
GINARTPPKKPSVGQKKPLEAPGSSPPLPSKKQKVSGAFLDQSIEQLNDVTAVSGVNLRE
EEEQLFSGPKEESRVSEASRKVVQEEEERLILQKTPLQKKLAEIMAKCGLKNISNDVERC
LSLCVEERMRGLLCNIIRLSKQRVDPEKTGHRTIITSDVRQQIMIMNRKAREEWDKKQAE
AEKLRKLNEPEGDGGVEGDKEKDEGRSKSVKANKEEDDKMRTTAANVAARAAVGGDDMLS
KWQLMAEQARQKREGGMDVASGSQGGKDVSRKPLSTSGRNLKDNQETEKRGHGAPIAGAV
RKLGRNQVVVPQTRVARAISLKDVVAVLEKEPQMSKSTLIYRLYEKIKPGSDAATE
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggaccccataatgaagctcctcgaagaagacgaggacgagtctatgcattcgggggca
gacgttgaggcgttccaggctgcgttaaaccgagatataggaggcgatgcgtctacttct
caaccatctgattcagattctgctttgtctcaaggaaaagaaagcaatcatgcctctggt
cagccaattttgcagtggcaaaatgtaagccaagatgacaataaacagtttcagtatcaa
cacggtctagaaagtgtacagcaggaagagcaaccttcgtcagaggtggagctaaagcaa
cttggatctattactgagaatcagcagccacagaatgacagctcagtctcagaggaacac
aaccgccttcttctacagcagaaacaatcccaagatgattctccacaagcaccagcagaa
catactcccactcaggttcctcaaacagcctcaatgcagatttctgaaaaaaatcctatc
ccagcacgtgagccagagaaaacacacaatcaagggagtgaatctcaattttcaaaaata
cagaagatgggaaatcaacaggcagtggccacggagcaggcgagtaaccctatgaatcgt
gggaaacaagttccatttgccttgttgcttcctgccttaataccacatcttgacaaagat
agagccatgcagctgcatactctatatggtaaactgaagaaaaacgaaattcttaaagat
atatttgtccgacacatgagggacattgtaggggaccagatgctcagattggcagtaagt
aagatgcaatcacagatgggtaccaaacagttccagttacagtcccaagcttcagcacgc
caacagcatttaaggatgccatctccaactgctggtgccacacaattctctgatacccat
tcatttgcaccacttcatcataaaggttccaactctactgcagatccagctcatgctccc
gcctcaacagttcaaatgcaggtgggttcaacttttgcaattaaagaaaacaatgctcaa
aaacctagagagctggaacgtcaaccaggttctcatggaatacatgcaagccaaatggct
tcctccagtccaagcactgtcaatcaagagagggaacgctcttctgttcctgtacaagga
cttaacaagcagcaacaacaacatttgcactttccacaaacttcctttcccatgtatgga
agtggcggtggtaattatcacccatattctgcaacaaatgtcaatccacctggatcatct
ctgaaaccacatcctcatgattcacaaatgaggcaaattagtcatcctcagaacatggga
tcagcttcatcaggaggggcaagccaagccatgagcacgattaatgtgcctaagtttgag
aggcaaaactctattaatgagccgggtaaagtgcagggtggttcgatttctcactttaca
aatagttcaacatctcaacagaacacagttccttggcaaccaccaacaaataaagagcat
aattctggcccgttgtcatcaatgacatatgtaaagccagagccggttgatcagggtatt
gaccagcagcacaaatcccttccatctaccccaaaaggattgtctgttgcaccagttgaa
cagggaaacgcagttcctggaacaatgaaggatgaagcttttgagaagcaatctcccaga
attggtttcccaacatctacaagtatgctgccctcaaattcagtgtctccttccacaaca
acacagcaggatccaaatgtgtcgttgagttctcggattccatctgtgacctctccagct
ggaattaatgcaaggacacctccaaaaaaaccttctgttggccagaaaaaaccacttgaa
gcacctggctcttcaccacctttgccaagtaagaagcaaaaagtatctggggcctttttg
gatcaaagcattgaacaactcaatgatgttactgctgtcagtggagttaacctcagggaa
gaagaagaacaactattttctgggccgaaggaggaaagtcgagtttcagaagcatctcga
aaggttgtgcaagaagaagaagaaaggctgattttgcagaaaactcccttgcagaagaaa
ttggctgagatcatggccaaatgcggtttgaagaatataagcaatgatgtggaacgatgc
ttgtctttgtgtgttgaggaaagaatgcgtggactcttatgtaacataatcagattgtca
aaacagcgggttgatcctgagaaaactggacaccggactattatcacgtcagatgttcga
caacaaattatgataatgaaccgcaaagctagggaagaatgggataagaagcaggctgaa
gcagaaaagctccggaaacttaatgaacctgagggtgatggtggggttgagggcgataag
gagaaagatgaaggtcgttcaaaatcagttaaggcaaacaaggaggaggacgacaaaatg
agaaccacagctgcaaatgttgctgctcgtgctgctgttgggggagatgacatgctgtca
aaatggcaacttatggctgagcaagctcgccagaaacgtgaggggggtatggatgtggca
tctggttcccagggtggaaaagatgtcagtcgcaaacctctatcaacatctggaaggaat
ttgaaggataatcaagaaacagaaaaaagagggcatggagctccaattgctggtgctgtt
agaaaattgggaagaaaccaagttgtggtgcctcaaactagggtggccagagccatctct
ttaaaagacgtggttgcagttttggaaaaagaaccccagatgtccaagtcgactctaatt
taccgcttgtatgagaaaatcaaacccggttctgatgctgcaactgaataa
DBGET
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