KEGG   Pistacia vera (pistachio): 116129021
Entry
116129021         CDS       T07386                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03082  ATP-dependent chromatin remodeling
pvy03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    116129021
   03083 Polycomb repressive complex
    116129021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pvy03036]
    116129021
Enzymes [BR:pvy01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     116129021
Chromosome and associated proteins [BR:pvy03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     116129021
   HDAC complexes
    Sin3A-HDAC complex
     116129021
    BRAF-HDAC complex
     116129021
    REST complex
     116129021
    SHIP complex
     116129021
    MiDAC complex
     116129021
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     116129021
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    116129021
  Chromatin remodeling factors
   NuRD complex
    116129021
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 116129021
NCBI-ProteinID: XP_031270614
LinkDB
Position
Unknown
AA seq 404 aa
MKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFSH
ELAKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG
FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDMFFPGT
GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYVPGAIVLQCGADSLAR
DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGVLLDTELPNEI
PDNEYIKYFAPENSLRIPNGHIENLNSKSYLSTIKMQVLENLRCIQHAPSVQMQEVPPDF
YIPDFDEDEQNPDERIDQHSQDKQIQRDDEYYEGENDNDHMEVG
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgaagccacatcggctttgtatgacgcaccatctcgttctatcatatgagcttcacaag
aagatggaaatctatcgtccccacaaggcgtatcctgtggagctagcgcagttccattca
gctgattatgttgaattcttacaccgaattactcccgacactcaacatttgttctcacac
gaattagctaaatataatcttggagaagattgccctgtctttgaaaacttgttcgaattt
tgtcaaatttatgccggtgggacgatagatgctgcacggagattaaacaatcaactctgt
gacattgccatcaattgggctggggggttacaccatgccaaaaagtgtgaagcatctggt
ttctgttacattaatgacttggtcttggggatcctggagcttttgaaataccatgcccgt
gtgttgtatattgatatagatgtgcatcatggtgatggtgtagaagaagctttttatttc
actgacagggtaatgactgttagttttcacaagtttggggatatgttctttcctgggact
ggggatgttaaggaaataggagaaagagaaggcaagttttatgctataaatgtcccactc
aaggatggaattgatgacactagcttcactcggcttttcaagacgattatctccaaggtt
gttgaaacatatgttccaggtgccatagttcttcaatgtggagcagattctcttgctagg
gatcgcttaggctgtttcaatctctccatcgatgggcatgctgaatgtgttcggtttgtg
aagaaattcaatttgcccttgctggttactggaggtgggggatacacgaaagaaaatgtt
gctcggtgttggactgttgaaacaggagtacttttggatacagagcttcccaatgagatc
ccggacaatgaatacatcaagtattttgcccctgaaaattcattgaggattccgaatgga
catatagagaatctgaatagcaaatcatatcttagcacaataaaaatgcaagtgctggaa
aatcttcgatgcatccaacatgctccgagtgtacagatgcaagaggttccacctgacttc
tatattcctgattttgatgaggatgagcagaaccctgatgaacgaatagatcagcactct
caagacaagcaaatccaacgtgatgatgaatattatgaaggagagaatgataatgatcac
atggaagttgggtaa

DBGET integrated database retrieval system