Pistacia vera (pistachio): 116129699
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Entry
116129699 CDS
T07386
Name
(RefSeq) LOW QUALITY PROTEIN: squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvy03041
]
116129699
03036 Chromosome and associated proteins [BR:
pvy03036
]
116129699
Spliceosome [BR:
pvy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116129699
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
116129699
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_C
ATR1_WY-dom
Motif
Other DBs
NCBI-GeneID:
116129699
NCBI-ProteinID:
XP_031271284
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MPRNVIPLVVPSTNPKSGELEDKKLKSNNEFREMFPKKLVKLPLTPIMWQEWAQDEASIS
TGYAFLGIEKIYERGVSNYLPVSLWCDCLRFVQEYDPSVREFSPDGIANGRNVFERAVTA
AGVHVAEGSKIWETYREFEQAILHTTDETNIKEKEKQVQRIQSIFHHQLSVPLANVRSTL
LTYKSWEVELGTALDVESHDLDGIPSTIATAYEKALEMYNARADLKNGLQQDISDFENFK
NSRYMIYLKFEQSSRDSARVQLLYKRAITEFPVSSDLXLDYTCYLDKTLKVGNIVRDVHS
RARKNCPWVGGLWVRSLLASEHCSAPEKEISTVFEKSLLCTFLTIEEYLNLFLTRVDGLR
RRILLPGVEEDELNFPLIRETFQCASDYLSQQMKNIDDLLLLYAYWARLELNLAAALGVW
ESLVKICRSMLEALQGYIAMEIELEHLNQPRSIYKRCYSKRFSGTGS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaaatgtcataccacttgttgtgccctcgacgaatccaaaatccggggaactg
gaagataagaagctgaagtcgaataatgagttcagagaaatgttccctaagaagttagtg
aaacttccattgactcctattatgtggcaagaatgggctcaagatgaagcttctatttca
actgggtatgcatttctagggattgagaagatttatgaaagaggagtttctaattatctg
cctgtctcactttggtgtgactgcttgagatttgtgcaagaatatgatccatctgtacgt
gaattttcacctgatggtattgcgaacggaagaaatgtcttcgagcgtgctgtaactgct
gctggtgtgcatgttgctgaaggtagtaaaatatgggaaacatacagggaatttgagcag
gccattctccatacgacagatgagaccaacattaaggaaaaagaaaaacaggttcagcgc
atccaaagtatatttcaccatcagttgtctgttccccttgctaacgtaaggtcaaccctt
ctcacctacaagtcttgggaggtggaactggggactgctctagatgttgaatcacatgat
ttagatgggattccttctactattgccacagcgtatgaaaaggcattggaaatgtataat
gctcgagctgatttgaagaacggattgcagcaggatatatctgacttcgaaaatttcaaa
aattcacggtatatgatctacttgaagtttgaacagtcttctagagattcagcccgtgtt
caacttctctataaacgtgctattaccgagtttcctgtatcaagtgatctctagcttgat
tatacttgctatttggataaaaccttgaaggtaggaaatattgtgcgggatgttcattct
agggctaggaaaaattgtccttgggttggtggtctttgggttcgatctttgcttgcttcg
gaacattgcagtgcacctgagaaagagatatctactgtctttgagaagtcccttctatgt
acttttttgaccattgaggagtacctaaacttattcctcactcgagtggatggtttgaga
cgaagaatccttttgcctggagtagaagaggatgaactgaattttccattgataagggaa
acctttcagtgcgcatcagattacttatctcagcagatgaagaatatagatgatttgttg
cttttgtatgcttattgggctcgtttggagctaaatttggctgcagctctaggtgtttgg
gaaagcctggttaagatctgcaggtcaatgttggaagccttgcaaggttatatagctatg
gaaattgaattagaacatttaaatcaacctaggtccatctacaagagatgctacagtaaa
aggtttagtgggacaggttcatag
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