Pistacia vera (pistachio): 116129723
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Entry
116129723 CDS
T07386
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03430
Mismatch repair
pvy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116129723
03460 Fanconi anemia pathway
116129723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116129723
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
116129723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
116129723
NCBI-ProteinID:
XP_031271297
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MDDKETERAEVSLEPPKIQRLEESVVNRIAAGEVIQRPVSAVKELVENSLDANSTSINVV
VKDGGLKLIQVSDDGHGIRYEDLAILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYV
GHVTVTTITKGQLHGYRVSYRDGLMEQEPKPCAAVKGTQIMVENLFYNMIARKKTLQNSS
DDYTKIVDLLSRLAIHHINVGFSCRKHGAARADVHSVTTSSRLDSIRTVYGVSVARSLMN
IEASDNDPSTSVFKMDGFISDSNYVAKKATMVLFINDRLVECSALKRAIEIVYTATLPKA
SKPFIYMSIVLPSEHVDVNVHPTKREVSLLNQEIIVEKIQSAVELKLRQSNESVTYQEQT
VASSPSSSLGTSKELQPKLLSPGSQSQKVPVHKMVRTDSSDPAGRLHAYLQTKPHKHLAE
NSSLTAVRSSVRQRRNPNETADLTSIQELIDDIDCNCHSGLQEIVRQCTYIGMADDVFAL
LQHKTHLYLANVVNLSKELMYQQVLQRFAHFNAIQLSDPAPLPELIVLALKEEDLDPESS
ENDDLKEKIAEMNTELLKQKAEMLEEYFCIKIDTHGNLSRLPVILDQYTPDMDHVPEFVL
CLGNDVDWEEEKSCFQSIAAALGNFYALHPPLMPNPSGEGLVNYKKRKAFTNTENEGEPS
NSTGDDVEMEDEIDHELVSEAEAAWAQREWSIQHVLFPAMRLFLKPPTSMATNGTFVQVA
TLEKLYKIFERC
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaaggaaactgagagagccgaagtgtcgttagagccacccaaaatccaacgc
ctagaagagtccgtagtcaaccgcattgctgccggtgaggttatccaacgccctgtctcc
gccgttaaagagctcgttgagaactctctcgacgccaactccacttccataaacgtcgtc
gtcaaggacggtggcctcaagctcattcaagtctctgatgacggccacggcattcgttat
gaggacttggcgatactttgtgagaggcacactacttctaagttgtcgaagtatgaggac
ttgcagtcgattaaatccatgggatttagaggagaggctttggccagcatgacttatgtt
ggtcacgtgacggtcacgaccatcaccaaaggacagttgcatggttatagggtatcttac
agagatggtttgatggagcaagaaccaaagccgtgtgctgctgtaaaaggaacgcagata
atggtggagaatttgttttacaacatgattgctcgaaagaagacattgcaaaactcttct
gatgattatacgaaaattgttgatttgttaagccggttagccattcatcacataaatgtg
ggcttctcttgtagaaagcatggagctgcaagagcagatgttcactcagttactacatca
tcaaggcttgattctattagaactgtttatggggtatcggttgctcgcagtctgatgaat
atagaagcttcagacaatgatccctcaacttcggttttcaaaatggatggtttcatatct
gattcaaattatgtggcaaagaaagcaacaatggtgctttttattaatgataggttggtt
gagtgttctgctttgaagagagctattgaaattgtttatactgcaaccttgcctaaagct
tcgaaacccttcatctacatgtcaattgtattaccatctgagcatgttgatgtgaatgtg
cacccgacaaagagagaggtaagccttttgaatcaggaaatcattgttgagaagatacag
tcagctgttgaattgaaactgagacagtcaaatgagtcagtgacatatcaagaacagact
gtggcatcctctccttctagctccttgggtacaagcaaagagttgcagcctaaactcctt
tcccctgggtcacaatcgcaaaaggttccagtgcataagatggtaagaacagattcatcg
gatccagctggaaggttgcatgcctacctccaaaccaagcctcataaacatcttgcagag
aattctagtttaactgctgtcaggtcttctgttaggcaaagaaggaacccaaatgaaact
gcagatcttaccagtattcaggaacttattgatgatatagattgcaactgtcattctggt
ctacaggaaattgtgaggcagtgcacatatataggaatggcagatgatgtttttgcgttg
cttcagcataaaactcatctttatcttgcaaatgtagtaaacctaagcaaagaactcatg
tatcagcaagttctgcaacggtttgcccatttcaatgctatacaactaagtgacccagca
cctttgccggagttgattgtgttggctctcaaagaagaggacttggatccagaaagcagt
gagaatgatgacctaaaagaaaagattgctgaaatgaatacagaactgctcaagcaaaaa
gctgaaatgctggaggagtatttctgcattaaaattgacacacatggcaacttatctagg
cttcctgttatactagaccagtacacccctgacatggatcacgttcctgaatttgtactt
tgtttgggcaatgatgttgactgggaggaggaaaaaagttgttttcagtcaattgcagct
gcccttggtaacttctatgcactgcatcctcctctgatgcccaacccatcaggtgaaggt
ttggtaaattacaaaaagagaaaagcttttacaaatactgaaaatgaaggagagccctca
aacagtactggtgatgatgttgaaatggaggatgaaatcgaccatgaactagtttcagag
gcggaggctgcttgggctcagcgtgagtggtcaattcagcatgtcttatttccagctatg
agactctttctcaaaccaccaacttccatggctacgaatggaacatttgttcaggtagca
acattggagaagctctacaagatttttgagagatgctaa
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