Pistacia vera (pistachio): 116129840
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Entry
116129840 CDS
T07386
Name
(RefSeq) uncharacterized protein LOC116129840
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116129840
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116129840
Surveillance factors
Other surveillance factors
116129840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
116129840
NCBI-ProteinID:
XP_031271430
LinkDB
All DBs
Position
Unknown
AA seq
1715 aa
AA seq
DB search
MADGKLDLPDDLLSSKTLDQDRSVKDEAWGGTSEEKSLMGLLDESKDQVTPENSIPLSPQ
WLYAKPVDPKTLTTGGEMRAPNSLPQGNTTDTNLKDSWRLDGSQDKKDWRKTVPDIESSR
RWREEERETGILGRRDRRKEDRRADVTSSRDISETRALSSADRWHDPSNRTSGHESRRDS
KWSSRWGPEDKEKDSRTEKRTEAEKEDTQIDRQSFVSGNRTTSERDNDSRDKWRPRHRME
VHAGGSAAYRSAPGFGLERGRVESSNVRFAPGRGRSTINGSQQIGRPPSVSVIGSVPVNK
LSGSSAVYCYPRGKLLDIYRKEKTLLNFDSVADEMDHVSPITQVASIEPLAFVAPDAEEE
AILGDIWKGRIRSSEVLQNSNRDKSVASSVNTTGFGDTTIGEGKQSSSVNTEGTVESLEK
TGVNNSGQGNGAEALSSSGSHVAKERGGFKEGEGIRSGATDVMHDSLIPSVLKGNDTCGA
GETTDSSNSVNEVKFVENQRADDLILTKHPKLEDIKSAASFEVGNQLPDDSNSLFDFASL
QQTANRDQLHQKSNNSAHPSDVGVSLEDLNLFYLDPQGVIQGPYMGIDIIMWFEQGYFGT
DLPVRLSNAPAGSAFQELGVLMPHLKVKSGSSICNNLVTTSQLSDTVVGSLEESVGSPAS
GPDYKGSAFVNNQLWVSTGFEATSGIDFRSGVPNHEHQSEPHLPDNQSFQNSVAQDEEIV
FPGRPGSSNANHMRRSGADIHSSFSSPASHHSLVSEFSEANMPRHQEDDKVHPFGLLMSE
LRDSSHLRRSQSSNLASSIGDQGQFLDSFDRDPTIVSQSSLGTWADQPAFGEMWPEDHRR
NTFSKSHPHQGSIDAQQLFRREQELNGFDVAEHLMLQKLQKEQLQQQNYSSPHPFSYTNE
LGMEQIPGFSLSQSKNLHQQQSAHPVADMKQLLELKLQQQRHIELQQQQHLELQHQRHIE
LQHQRHLELQHQRQFELQHQRQLELQQQRQLMLQQQRQLELEQQRQLELEQQRQLELQQQ
HRLLQQQQIRFNQMKLLQQQQQQQQQQQLLLEQLLQHQMPDPGYGQLKVEPVRDNMLDQV
QLRMQLLHELQLNSQARHLDPSLEQIIQAKIGQSALRGQPADLLDLRSQAKHVNMLSSEQ
QLHFQQEQLRARQLSMALRQQSGLEGEGRITGPWSVDEAGQLARSPSGHHQAHSAGFSAS
DFYQQQQRLSSHEEQFNHHNWNHALQERHQRGSFEPSSMALDRSLSVPPAVTPGRNLDNI
NARAQGLDFPDQHLYMHSTGQLSSFSSGIPSHSQQISDEFYATHPDMKESHSGNNMLQEN
SWIEKQMQQLNLKGDRQRQDSEVNMTSVDTSLWTSTGGDRENSERVLMDLIRQNSGLQSV
QSSEIGYQHKTREAFWPVSETQSSNLPFNLLPGQEVIVSSSFVEGPQNSNSSAQFKHSGN
GERLIIRSNSGALLEQPFLSSSIEHSSPIGKSTLDKDFLELEGPKGKRHGSKGMGMSISE
IKDNSVEQAENSLDYGELPINAHSRHSSLSSVGGNGGLYNYEIGLDKSLGEFSNERLPSI
LPKGLDTDLSKHQLLARASTSQDVLPEPTSAAFVKQKSSITLASDEGKRESVGNPVANRL
PETQASSKKDLRFRTSSFSEAAVSETSFIDMLKKPVLPEADPLNGAALESSDVAAPAGRS
GKKKGKKGRQIDPALLGFKVSSNRIMMGEIQRLED
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggaaagctcgatctgccggacgatctcctctcttctaagacgctcgatcaa
gaccgctccgtcaaagatgaagcttggggaggaactagtgaggagaagtccctgatgggg
ttacttgatgagtcaaaagatcaagtaactccagagaacagcataccgctgtctccacag
tggctctatgctaaaccagttgatcctaagacattgactacaggaggggaaatgcgtgca
ccaaattcattgcctcagggaaacacaactgatactaatttaaaagacagttggcgttta
gatggatctcaagacaagaaagactggaggaagactgtgcctgatattgaaagcagtcgc
cgctggcgtgaagaggagagagaaacaggcatacttggtagaagagatcgcagaaaagaa
gatcgtcgtgcagatgtcacctcatctagggatatatctgaaactagagctttgtcttct
gcagatcgttggcatgatcctagtaaccgtacttctggccatgaatcccggagagacagc
aagtggtcttcaaggtggggtcccgaagataaagagaaggattctcgaactgaaaagagg
acagaagctgagaaggaagatactcagattgacagacaatcttttgtcagtggcaatcgc
accacttccgagcgtgacaatgactcccgtgataagtggaggccacgtcatcgcatggaa
gttcatgcaggtgggtcggctgcataccgctctgcaccaggatttgggttggagcgggga
cgggtagaaagctcaaatgttcgatttgctcctggacgtggtaggtctactatcaatgga
agccaacaaataggcaggcctccctctgtatctgttattggctccgttcctgtaaataaa
ttatctggctcctcagctgtatattgttatcctagaggaaagcttcttgacatttatcgt
aaagaaaaaacacttctgaattttgattccgtagctgatgagatggaccatgtatcacca
ataacacaagtagcctccattgagcccttggcttttgttgctcctgatgcagaggaagag
gctattcttggggatatatggaaaggaagaattagaagcagtgaagtattacagaactct
aatagggacaaaagtgtggcatcaagtgttaatactacaggatttggtgacacaactatc
ggcgagggtaaacagagttcttcagttaatactgaaggaactgttgaatctttggaaaaa
actggtgtaaataattctggtcaaggtaatggtgccgaggcattaagctcatctggttcc
catgttgccaaggaaaggggtggttttaaagaaggtgaaggtattaggtcaggtgcaact
gatgtcatgcatgatagcttgataccttcagttttgaagggaaacgatacatgtggtgct
ggagagactaccgactccagtaacagtgttaatgaagtgaaatttgttgaaaaccaacga
gcagatgatttgattctcacaaagcaccctaaattggaagatattaaatcagctgcttct
tttgaagtcggtaaccagcttcccgatgattcaaattctctatttgattttgcatctctg
caacaaactgcaaacagggatcagcttcatcaaaaaagcaataacagtgcacatccatca
gatgttggtgtatcactagaggatttaaatttgttctatcttgatcctcaaggagtaatt
cagggaccatacatggggattgacatcattatgtggtttgagcaaggttattttggaact
gatttacctgttcgattgtcaaatgcccctgctggatcagcttttcaagaacttggtgta
ctcatgccgcatctgaaagttaaatctgggtcctccatatgcaataatctggttacaaca
tcacagctgtctgatactgttgtaggcagcttggaagagagtgtaggctctcctgctagt
ggacctgattataaggggtctgcttttgtaaataatcagctgtgggtttcaactggtttt
gaggctacttcaggtattgattttagatcaggagtgcctaatcatgaacatcagtctgag
ccccatcttcctgacaatcaaagcttccaaaattctgttgctcaagatgaagaaattgtc
tttcctgggagacctggaagcagcaatgctaatcatatgaggagatctggtgctgatatt
cacagttcattttctagtcctgctagccaccattcccttgttagtgagttttcagaagct
aatatgcctagacatcaggaggatgataaggtgcatccttttggtctgttgatgtctgag
ctgagagatagctctcatttgaggcgttctcaatcatcaaatttggcttcaagcataggt
gaccagggtcagttcttggattcttttgacagagatcctacaattgtcagccaaagctct
ttgggtacatgggctgatcaacctgcttttggggagatgtggcctgaagatcatagaagg
aatacattttcaaaatcccaccctcatcaaggttctatagatgcgcaacaattatttcgt
agggagcaagaattgaatggttttgatgtagcagagcacttaatgttacaaaagttgcaa
aaggaacaacttcaacaacaaaattattcttctcctcatcctttttcatatacaaatgag
ttggggatggagcaaattcctggtttttctctttctcagagcaagaatctgcatcaacag
cagtcggctcatccagtagcagacatgaaacaacttttggaacttaagttacaacaacag
agacatatcgagcttcaacaacagcagcatctcgagcttcaacaccaacggcatattgag
cttcaacaccagcggcatcttgagcttcaacaccaacgacagtttgagcttcagcaccag
cggcagcttgagcttcaacaacagcggcagctcatgctgcaacaacagcggcaacttgag
cttgagcaacagcggcagcttgagcttgagcagcagagacagcttgaacttcaacaacag
catcgcttgctgcagcagcagcagatccgtttcaaccaaatgaagttgctgcagcagcag
cagcaacaacaacagcaacagcagttacttctggaacaattgttgcagcatcagatgcct
gatcctggttatggacagttgaaggtggaacctgtaagagataacatgctcgatcaagtt
cagttaaggatgcaacttctacatgaactccaactgaattctcaagcaaggcacctcgat
ccatcactggagcagatcatccaagcaaagattggtcagagtgcactccggggacagcca
gctgatttgttggacctaagatcacaagcgaagcatgtgaatatgctttcttcagaacaa
cagcttcatttccagcaagaacaattgcgagcacgtcagttatccatggcattgaggcag
cagtcagggctggaaggggaagggcgtataactggcccatggtcggttgatgaggctggt
cagcttgccaggagtccgtctggtcatcaccaagctcattcagcaggttttagtgcttca
gatttttaccagcaacagcagaggctttcttcgcatgaggagcaattcaaccaccataac
tggaatcatgctttacaggaacgacatcagagagggtcatttgagcctagctctatggca
ttggataggtcattgtctgttcctcctgctgtcactcctggaaggaatttagataatata
aatgcacgagctcaaggtctagattttccagatcaacatctctatatgcactcaactggt
cagctgagttccttttcttctggcatcccctcacactcccaacaaatctctgatgaattt
tatgctactcatccagatatgaaagagagccactctgggaacaatatgctgcaggaaaat
agctggattgaaaaacagatgcaacaattgaaccttaaaggtgatagacaacgacaagac
tcagaagttaatatgacttctgtggatacaagtttgtggacatccactggcggtgatagg
gagaactcagagcgagttttaatggatcttatccggcaaaattcgggtcttcaatctgtg
cagtcctcagaaattggttaccaacataaaacccgggaagccttttggccagtttctgag
acgcagtcgtcaaatcttccttttaatcttctcccaggtcaagaagtcattgtgagcagc
tcctttgtggaagggcctcaaaattccaattcaagtgcacaattcaagcattcagggaat
ggtgaaagattaatcataagatctaattctggagcactattagaacagccattcttgtcc
agcagcatagaacattcgagccccattggtaaatcaactttagataaggacttcttagag
ctggaaggacctaaggggaagaggcatgggtccaaaggcatgggcatgtcaatttcagag
atcaaagacaactcggtggagcaagcagaaaactctctggattatggagagctaccaatt
aatgcccacagtaggcatagttctttaagtagtgttggtggaaatggaggcttatacaat
tatgaaatagggctagacaagtcacttggagaattttcaaatgaaaggcttccctctata
ttacccaaagggcttgacactgacttgagcaaacaccaacttctagcaagagcttcaact
tcccaggatgtgttgcctgagccaacttctgcagcttttgtcaagcagaaaagttcaata
acccttgcatctgatgaagggaagcgggaatctgttggtaatcctgtagcgaatcggctt
cctgaaactcaagcatccagcaagaaagatttgcgttttaggacatcatctttcagtgag
gctgctgtttcagagacatcattcatagacatgcttaagaaaccagttctcccagaagct
gatccattaaatggagcggctttggagtcatctgatgttgctgcaccagctgggcgaagt
ggcaaaaagaaagggaagaaaggaagacagattgatcctgctctccttggcttcaaagtt
tctagcaaccggatcatgatgggtgagatccagcggcttgaagattga
DBGET
integrated database retrieval system
