Pistacia vera (pistachio): 116130012
Help
Entry
116130012 CDS
T07386
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy00100
Steroid biosynthesis
pvy00909
Sesquiterpenoid and triterpenoid biosynthesis
pvy01100
Metabolic pathways
pvy01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
116130012
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
116130012
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pvy01006
]
116130012
Enzymes [BR:
pvy01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
116130012
Prenyltransferases [BR:
pvy01006
]
Terpene biosynthesis
Squalene/phytoene synthase
116130012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
DUF7589
Motif
Other DBs
NCBI-GeneID:
116130012
NCBI-ProteinID:
XP_031271622
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MGTLGAVFRHPDDIYPLLKLKRAVKNAAKQIPPEPHWAFCYTMLHKVSRSFALVIQQLDT
DLRNAVCIFYLVLRALDTVEDDTSIPTEVKVPILLAFHSHVYDRDWHFACGTKDYKVLMD
QFHLVSTAFLELGKGYQKAIEDITQKMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL
SKLFYASGKEDMAPEDLSNSMGLFLQKANIIRDYLEDINEIPKSRMFWPREIWSKYVNKL
EDLKYEENSVKAVECLNDMVTNALTHAEDCFKYISALKNPAIFRFCAIPQVMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDRTNKMSDVYGAFYDFSCMLKSKINKNDPNATKTLSRI
NAIQKTCMDSGVLNRRKSYIIQNGPNYNSTMIFLLFIILAIIFSYLSANRSTN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgggaacattgggagcggttttcaggcacccagatgatatttacccgctcttgaagctg
aaaagggcggtaaaaaatgcggccaagcagatcccacctgagcctcactgggctttttgt
tatactatgcttcacaaagtctctcgtagtttcgctctcgttattcagcagcttgatacc
gacctcagaaacgctgtatgcatattttatctagttcttcgtgcacttgacactgttgag
gatgatacaagcatacctacggaggtcaaggtgcctattctcttggcttttcatagtcat
gtgtatgatcgtgactggcattttgcatgtggtacaaaggattacaaagttctcatggac
cagtttcatcttgtttcaactgcttttctggagcttggaaagggttatcagaaagcaatt
gaggatattacccaaaaaatgggtgcagggatggcaaaatttatttgcaaggaggttgaa
acaattgatgactatgatgaatattgccactatgtcgctggacttgttggactaggctta
tctaagcttttctatgcctctgggaaggaagatatggctccagaagatctttccaattca
atgggtttatttcttcagaaagcaaatatcattcgagattatctggaggatattaatgag
ataccaaaatcacggatgttttggcctcgtgagatctggagtaaatacgttaacaaactg
gaggacttgaagtacgaggaaaactcagtcaaggcggtggaatgcttgaatgacatggtc
accaatgctttgacacatgcggaagattgtttcaaatacatttctgcattaaaaaatcct
gctatattccgattttgtgctatacctcaggttatggcaattggaacactagcattatgc
tacaacaacattgaagtcttcagaggagtagtgaaaatgagacgtggtctcactgctaaa
gtcattgaccgaacaaataaaatgtctgatgtctatggtgccttctacgatttctcttgt
atgctcaagtccaagatcaacaagaacgatcccaatgcaacgaaaaccctgagccggatt
aatgcaatacagaaaacctgcatggattctggggtcctaaacagaaggaaatcttacata
atccaaaatgggccaaactacaattcaaccatgattttcctacttttcattatactggcc
atcattttctcgtatctctccgccaaccgatcaacaaactag
DBGET
integrated database retrieval system
