Pistacia vera (pistachio): 116130015
Help
Entry
116130015 CDS
T07386
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 23-like
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvy03021
]
116130015
Transcription machinery [BR:
pvy03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
116130015
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
116130015
NCBI-ProteinID:
XP_031271626
LinkDB
All DBs
Position
Unknown
AA seq
1608 aa
AA seq
DB search
MDQNQRSLAASSATPRAYQFHPXRAAILDLFNLYLSIRSSRQKHDDSLREPPNKTQKRVL
ALNRELPPRNEQFLLDFEQLQNQFPDQDQVRAVTESVLISLVVQCCSHVPRAEFLLFALR
SLCTIGYINWDTFLPSLLSSVSSAEMSMGQGSQAMPAVSSTSLSQSGMLHTLSTIPNSSN
YQSSNPASPLPSVHGIGSPAQSAIEPSTCAPMSPVKSSDASYSGQQFTTRANPSIRDNTI
SCLRQLCCKIILAGLEFNLKPVTHAEIFYHMLNWLVNWDQRQQGIDESDVKSWRPDKALI
EWLHSCLDVIWLLVEEDRCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMATH
MQMLDQHLHCPTFGTHRILSQTTPNISVEVVANLRYSPITYPSVLGEPLHGEELANSIQR
GSLDWERAMRCIRHAIRTTPSPDWWKRVLLVAPFYRNPAQGPTPGAVFTSEMICEAVIDR
IAELLKLTNSEINCWQEWLVFSDIFFFLMKSGCIDFVDFVDKLVSRLTEGDNHILRTNHV
TWLLAQIIRVELVMNALNQDARKVETTRKILSFHREDRCSDPNNPQSILLDFISSCQNLR
IWSLNTSTREYLNNEQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSIGMFWVVSYTMAQP
ACETVMNWLSSAGVTEWTGSNLHPXERLMMTREVSPLPCPXISGFSLNLCLKLAFQMEEX
LFAGQVVPSIAMVETYTRLLLLLPHSLFRSHFSHLAQRNPSLLSKPGVTLLVLEIVNYRL
LPLYRYQGKSKPLMYDVTKIISALKGKRGDHRVFRLAENLCINLILSLRDFFSVKREGKG
PTEFTETLNRITIITLAITIKTRGIADADHLLYLQTMLDQIMATSQHTWSEKTLRYFPSL
LRDALNGRIDKRGQAMQAWKQAEATVINQCTQLLSPSADPTYVMTYISHSFPQHRQYLCA
GAWILMQGHPESINCGNLLRVLKEFSPEEVTANIYTMVDVLLHHIHAELQRHLLQDLLLK
TCANLSFFVWTHELLPLDILLLALIDRDDDPHALRIVISLLERQELQQRVSLFLNRGLPE
HWLYSGMFKRVELQKALGNHLSWKDRYPTFFDDLAARLLPVIPLIVYRLIENDAVDPAER
VLVTYSKFLAYHPLRFTFVRDILAYFYGHLPAKLILRILHVLDLTKIPFSESFAQIISSP
NPAMCPPLDYFATLLLGLVNNVIPTLNSNSKPGSMGDASVRATHNKTPAASHSGPTNASE
GQKAFYQIQDPGTYTQLVLETAVIEILSLPVPAAQIVSALVQIVVNIQPTLIQNSNGPQG
ASSSVGQGSVLPTSPSGGSTDSLSASRSTPSVSGINTSSFVARSGYTCQQLSCLLIQACG
LLLAQLPQEFHLQLYMEASRVIKDSWWLTDGKGSLVELDCAVGYALLDPTWAAQDNTSTA
IGNIVALLHAFFSNLPQEWLEGTHAIIKHLRPITTVAMLRIAFRIMGPLLPRLANAHTLF
NKTLALLLNTMADVFGKNSQPSTPVEASEIADLIDFLHHVVHYEGQGGPVQSNSKPRPEV
LTLCGKAAENLRPDVQHLLSHLKPDMNSSIYAATHPKLVQNPSTVGLS
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaaccagagatcactagcagcatcatcggctactcctcgggcctaccagttc
cacccgncccgagccgctattctcgatctcttcaatctctacttgagtataagaagtagc
cgccagaagcacgacgattccttgcgtgaacctccaaacaaaacacagaagcgtgtgctt
gctctcaacagagagctccctcctcgaaatgaacagttccttttagattttgagcagcta
caaaaccagtttcccgaccaggatcaagtgcgtgctgtgacagaatctgttctcatttcc
ctagttgtgcagtgctgtagtcatgtaccacgagcagaatttcttctctttgctttacgg
agcttgtgtactattggttacattaactgggatacttttttgccatcccttctttcttct
gtgtcatcagcagaaatgtcaatgggtcagggcagtcaagcaatgcctgcagtttcatcc
acaagtttatcacagtctgggatgttgcatactttaagcacaattcccaattcttctaat
tatcaatcttctaatcctgcatctccattgccttcagttcatggtattgggtcccctgcc
cagtcagcaatagaaccatcaacttgtgcacctatgtctccagtaaaatcttctgatgca
tcctacagtggacagcagtttacaacaagggcaaatccttctataagggataatactata
agctgtttgcgtcagctatgttgcaagattattctagctggtcttgagttcaacttgaaa
ccagttactcatgcagagattttttatcatatgctaaattggctggtcaattgggatcaa
agacagcaggggattgatgaatctgatgtaaaatcctggagaccagacaaggctctcatt
gaatggttacatagttgtttggatgtaatttggctattggttgaggaggatagatgccga
gtgcctttttatgaattattgcgtagtggcttgcagtttatagacaatattcctgatgat
gaagccttatttacacttatcttagagattcataggaggcgagatatgatggctacacac
atgcagatgttagatcagcaccttcattgcccgacatttgggactcatcggattctctct
cagaccactcctaatatatcagttgaagtggtggctaatttgcgctattcaccaatcaca
tatccaagtgttctaggagaaccattacatggagaggaacttgcgaactctattcagagg
ggaagtttggactgggagagagctatgcgttgtataaggcatgctattcgcactactcca
tcacctgactggtggaagcgtgtgcttcttgtggctcctttctatagaaatcctgcacaa
gggcctactcctggtgctgtttttacttctgagatgatttgtgaggcagtaattgatagg
attgctgaactattgaagttaaccaattcagaaataaattgctggcaggaatggcttgtc
ttctcagatatattcttttttctcatgaaaagtgggtgcattgattttgttgattttgtt
gacaagctagtttcacgccttacagaaggcgataaccacattcttcgaacaaaccatgtt
acttggctgcttgcacagattattagggtggagcttgtgatgaatgctttgaatcaagat
gctagaaaggtggagacaaccagaaagattctgtcatttcatagagaagatagatgctct
gatcctaataacccccaaagtatcttgcttgattttataagtagttgtcaaaacctacgt
atttggtcattgaacacatcaacccgagaatatttgaacaatgagcaactgcagaaagga
aagcaaatagatgaatggtggaggcaagtgagcaaaggggatcgtatgatggattatatg
aatatggatgatagatcaattgggatgttttgggttgtgtcatacaccatggcacagcca
gcttgtgaaacagttatgaattggttatcctctgctggagttacagaatggacaggatca
aatcttcatccanntgaaaggttaatgatgacgcgggaagtaagccctttaccatgtccc
nntatatctggtttttcactaaacctgtgtttgaagctggccttccaaatggaagagnct
ttatttgctggacaggttgtgcctagcattgcaatggttgaaacttatactagactgctg
ttacttttacctcactctctgtttcgttcacacttcagtcatttggcacagcggaatcct
tccttattgagcaagccaggggtaactcttttggtgcttgaaattgtcaactaccggttg
ctgccactctacaggtatcaaggaaaaagcaaaccattgatgtatgatgttacgaaaata
atttctgccttaaaaggaaaacgtggagatcatcgtgtatttagattggctgaaaattta
tgcataaaccttattttgtcattgagagattttttctctgtgaaaagggaaggaaagggt
ccgactgaatttacagagactttgaatagaataactataatcactcttgccatcactata
aaaacacgcggaatcgcagatgctgatcacttactttatctccaaaccatgttagatcaa
ataatggcaactagtcaacatacatggtcggaaaaaactttgcggtatttcccgtctctt
ctacgtgacgccttgaatgggcggatagataaaaggggtcaggcaatgcaagcttggaaa
caggcagaagcaactgtgattaaccaatgcacccaactcctttcaccatctgctgatcct
acttatgttatgacatatatcagtcatagttttcctcaacaccgtcaatatctatgtgcc
ggtgcatggatactgatgcaggggcaccctgaaagcattaactgtggaaacctgttacgt
gtgctgaaagaattttccccagaagaagtgacagcaaatatctacacaatggtggatgtt
ctacttcatcacattcatgcggaacttcagcgacatttattgcaggacctgttgttgaaa
acttgtgcaaacctttcgttttttgtgtggacccacgagttgctccctctcgatatttta
cttctagcactcatcgaccgtgatgatgatcctcatgccttgcgtattgtgataagttta
cttgagaggcaagaactgcaacaaagagtgagtttatttctaaatcgtgggttgcctgag
cattggctttactctggaatgtttaaacgtgttgaattgcaaaaggcccttgggaatcat
ctctcatggaaggacaggtatccaacattcttcgatgatcttgctgcacgtttgcttcct
gtcatccctttaatcgtgtatagactcattgaaaatgatgccgtggatccagctgaaaga
gttctggtcacatattccaaatttctggcttaccatcctctaagattcacatttgttcgt
gatatacttgcatacttttatggacatttacctgcaaagcttattctcagaatattgcac
gtgcttgatctaacaaagattcctttttccgagtcatttgcacaaattattagttcacca
aatcctgccatgtgtccacccttggactattttgcaactctcttattgggtcttgtgaat
aatgttatacctacattaaatagcaactctaaacctgggtcaatgggagatgcttcagtg
cgtgctactcataacaagactccggcagcatctcactcaggaccaacaaatgcttccgag
ggtcagaaagcattttatcaaattcaggatcctggaacgtatactcagctggttctggaa
acagcagtcattgagatactttcacttcccgtgcctgcagcccagattgtgtcagcctta
gttcaaattgttgttaatatacaacctacactgattcaaaacagcaatggtccacaagga
gcttcaagcagtgtgggacaaggttcagttttaccaacatctccttctgggggtagtaca
gattccttgagtgcaagcagatcaactccttcagtttcaggaatcaacacctccagcttt
gttgccagaagtggttacacatgccaacaactgtcttgcttattgatccaagcttgcggt
ctcctattggctcagcttcctcaagaatttcacttacaactttatatggaggcatcgcgt
gttataaaagatagttggtggctcactgatgggaaagggtcgctggttgaactagactgt
gctgttggctatgctttgctggatccaacatgggctgctcaagacaatacttcaacagcc
attggtaacatagttgcattgcttcatgctttcttcagtaatctcccacaagaatggcta
gaagggacacatgccatcattaaacatctcaggccaataacaacagtagcgatgttaaga
atagcatttcgtatcatgggtccattgctcccaagactggccaatgcccacacactcttc
aacaagactctcgcattgcttctaaacacaatggcggatgtttttgggaagaactcacag
ccatcaactcctgttgaagcatcggaaatagcagatctcattgacttcctccatcatgtc
gtccattatgaaggacagggaggacctgtgcagtccaacagcaagcctagaccggaggtt
ttgacactttgtgggaaagcagctgaaaatttacgtcctgatgtacagcaccttctttcc
catttgaaacctgatatgaattcttcaatatatgcggcaactcatccgaagctggttcag
aatccctcgacagtcgggttatcatga
DBGET
integrated database retrieval system
