Pistacia vera (pistachio): 116130234
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Entry
116130234 CDS
T07386
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04142
Lysosome
pvy04144
Endocytosis
pvy05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116130234
04142 Lysosome
116130234
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116130234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvy04131
]
116130234
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvy04147
]
116130234
Membrane trafficking [BR:
pvy04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
116130234
Exosome [BR:
pvy04147
]
Exosomal proteins
Proteins found in most exosomes
116130234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
IcmW
Motif
Other DBs
NCBI-GeneID:
116130234
NCBI-ProteinID:
XP_031271838
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MAAANAPILMKEALTLTSVGINSQFINFTHVTMESDKYICVRETSPQSSVVVIDMNLPMQ
PLRRPITAESAIMNPDSRILALKARVPGATQDHLQIFNIELKTKVKAHQMPEEVVFWKWI
SATKVALVTQTSVYHWSIEGDSTPAKMFERTANLANNQIINYRCDPTEKWLVLIGIAPGP
TERPSLVKGSMQLFSVDQQRSQALEAHAASFATIKVPGNENPSLLISFASKSFNAGQVTS
KLHIIELGAQPGKAAFTKKQADLFFPTDFADDFPVAIQISQKYGLIYVITKQGLLFVYDL
ETATAVYRNRISPDSIFLTTEAPSVGGFYAINRRGQVLLATVNDSTIIPFVSGQLKNPEL
AVSLAKKGNLPGTENLVVQRFQELFSEAKYEEAAELAAESPQGLLRTPETVAKFQSIPVQ
AGQPPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECTEDLGDLV
KTLDNDLALKIYVKARATPKVVAAFAERKEFDKILIYSKQVGYTPDYLFLLKTILRSDPQ
AAVNFALMISQMEGGCPVDYNTMADLFLQRNLIREATAFLLDVLKPNLPEHGDLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYIRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSKEWTLECMKDLLLVNLRGNLQIIVQTAKEYCEQLGVDACVKLFEQFK
SYEGLYFFLGSYLSSSEETEIHFKYVEAAAKTGQIKEVERVTRESNFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYVNNMLRYIEGYVQKVNPGNAPLVVRQLIDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLLLITQFLEHLVSEGSQDVHVHNALGKIIIDS
NNDPEHFLMTNPHYDPRVVGKFCEKRDPTLAVVAYHRGQCDDELINVTNKNSLFKLQARY
VVERMDEDLWEKVLTPDNEYRRQLIDQVVSNALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGQVAVEAQLYE
EAFSIFKKFNLNVQAVNILLDNIRSIDRAVEYAFRVEEDVVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIKAAEDGNVYHDLVRYLLMVRQKSKEPKVDSELIYAYAKIDRLEEI
EEFILMPNVANLPNVGDRLYDEALYEAAKIIFSFTSNWAKLAVTLVKLKQFQGAVDAARK
ANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEQVSEYYQNRRYFNELISLMESG
LGLEHAHMGIFTELGVLYARYRAEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPQAWEHMQFKDVIVKVASVEIYYKAVYFYLQEHPDLINDLLNVL
ALRIDHTHVVDIMRKAGHLCLVKPYMVAVQSNNVSAVNEALNEIYVEEEEYERLRESIDM
HDNFDLIGLAQKIEKHELLEMRRVAAEIYKKAGRWKQSIALSKKDNLYKDAMQTCSQSGD
RELSEELLIYFIEQGKKECFASCLFVCYDLVSPDVALEFAWRHKMIDFSFPYLLQFIREY
TSKVDELVKHKLNALDEVKTKGKEEKDIVAQQNMHAQLLPLALPAPPMPGMGGPGMGVSF
VPPQPPPAMDGIGMPPMPPYGMPLMRSF
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccaacgctcccatcctcatgaaagaggctctaacgttaacgagtgtaggg
atcaacagccagttcataaactttacacacgtaacaatggagtcggacaagtacatttgc
gttagagaaacgtcgccgcagagcagtgttgttgttatcgatatgaacttgcctatgcag
ccgttacgccgtcctatcacggctgaatccgccatcatgaatcctgattccagaattcta
gctcttaaagctcgagtgccaggagccactcaagatcacttgcaaatatttaacattgaa
ttgaaaacaaaagtgaaagctcatcagatgccggaggaggttgtcttctggaagtggatt
agtgctacaaaggtagctctggtgacacaaacttcagtatatcattggtcgatcgaaggg
gattctacccctgcaaagatgtttgagcgaacagctaatctagcaaataatcaaataatc
aattatcgttgtgatcctactgagaagtggttggtcttgattggaattgcccctggtcca
actgagaggccttcattagtcaaagggagtatgcaacttttctctgtggatcaacagcgt
agtcaggcacttgaagcgcatgctgcatcttttgccacaattaaagtacctgggaatgag
aatccttcacttcttattagttttgcttcgaagtccttcaatgctggacaagtaacatca
aagttacatattattgaacttggtgcccagccaggcaaagcagcattcactaagaaacaa
gcagatttattctttcctactgactttgctgatgactttccagtggcaatacagatatct
caaaagtatggtttgatatatgttatcacaaagcaaggacttctatttgtgtatgactta
gagacagctaccgcagtttatagaaacagaatcagtccagattctatttttctgacaact
gaggctccatcggtaggtggcttttacgccattaaccggcgaggtcaggtgttgcttgct
accgtaaatgatagtacaattatcccttttgttagtggccagttaaaaaatccggaactt
gctgttagtcttgccaaaaagggaaacctacctggcacagaaaacttggttgtccaaaga
ttccaggagttgttttctgaggcaaaatatgaggaagctgcagaacttgctgctgaatct
ccacagggactcctccgtactcccgagactgttgccaaattccagagcattcctgtgcaa
gctggacaacctccaccattattgcagtattttggaaccttgttgaccaaaggaaaactc
aatgcttttgagtcactggaattgtcacgccttgttgtaaatcagaacaaaaagaatctg
ttggagaattggttggctgaggacaagcttgaatgcactgaggaccttggggatcttgtg
aagaccttggataatgatctggcactcaaaatatatgtcaaagctagagcaactccgaaa
gtggtagcagcatttgcagagaggaaggagtttgacaagattctgatatactcgaaacag
gttggatatacaccggattatttattccttctgaaaaccattttgaggtctgatccccag
gctgctgttaattttgctttaatgatttctcaaatggagggaggttgcccagttgactat
aacacaatggctgatctatttcttcagaggaatttgatccgtgaggcaacagccttttta
ttagatgtcctgaaaccaaacttacctgagcatggtgaccttcagacaaaggttttggaa
atcaatctcgtgacatttccaaatgttgcggatgctatattagctaatggcatgtttagt
cactatgatcgtccacgtattgctcaactttgtgaaaaggctggtctgtatatacgagct
cttcagcattacactgaattgcctgatattaaacgtgtcatcgtgaatacacatgccatt
gagccccagtctcttgttgagttctttggaaccctttctaaagaatggacccttgagtgt
atgaaagatcttttattggtcaatctcaggggaaatcttcagataattgtgcagactgca
aaagaatactgtgagcagttgggtgttgatgcatgcgtaaaactctttgaacagttcaag
tcctatgaaggactttacttcttcttgggttcatatttgagctctagtgaagaaactgaa
attcacttcaagtatgttgaagctgctgccaagactgggcaaattaaggaggttgaacgt
gtgactcgtgaatctaacttctatgaccctgagaagacaaagaactttctaatggaagcc
aagcttcctgatgcacgccctctgattaatgtctgtgatcgtttcggttttgttccagat
cttacccattacctgtatgtaaataacatgcttcgctatatagaaggttatgttcagaag
gtcaatccaggaaatgctcctttagtcgtacggcagttgatagatgatgaatgccctgaa
gatttcatcaaaggtcttattctttcagttcgatctctccttccagttgagccccttgtg
gaggaatgtgaaaagaggaatcgtctcctgttgatcacacagttcttggaacatcttgtg
agtgaaggaagccaagatgtgcatgtccacaatgctctgggtaaaattattatagacagc
aacaatgatcccgagcattttctcatgaccaatccacattatgatcctcgtgttgtgggt
aaattttgtgagaaaagggatccaacacttgcagttgttgcatatcacagaggacaatgt
gatgatgaacttattaatgtcacaaataaaaattccttgttcaaactgcaggccagatat
gtggtggaaaggatggatgaagatctctgggagaaagttcttacccctgataatgaatat
aggaggcagcttattgatcaggttgtttctaatgctttgccagaaagcaagagtcccgag
caagtttctgcagctgttaaagcttttatgactgctgaccttccacatgaattaattgag
cttcttgaaaagatagtgttgcaaaattctgcttttagtgggaacttcaatctgcaaaat
ctgctgatacttacagccattaaggctgacccatcaagagtcatggattacattaatagg
ttagacaattttgatggacctgcagttggacaggtggctgtggaagctcaattgtatgaa
gaagcattttcaattttcaagaaattcaatttgaatgtccaggctgtgaatatactgttg
gataacatccgaagcatagatagggctgtggagtatgcatttcgcgtagaagaagatgta
gtctggagccaggtggccaaagctcaacttcgggagggtcttgtgagtgatgcaattgag
tcatttattcgtgcagatgatgctacacagtttttagatgtcataaaggctgctgaggat
ggaaatgtataccatgatttggtcagataccttttaatggttagacagaaatcaaaggag
cccaaggtggacagcgaacttatttatgcatatgctaaaattgaccggcttgaagaaatc
gaggagtttattcttatgccaaatgttgctaatctcccaaatgttggggatcgcttatat
gatgaagccctatatgaggcggcgaagatcattttttcattcacttctaactgggctaag
ctggctgttacactcgtaaagctaaaacagtttcaaggtgctgttgacgcagctcggaaa
gccaacagctcaaaaacatggaaggaggtttgctttgcttgtgttgatgctgaggaattt
cgcttggctcagatatgtggtctcaacattatcatacaggtggatgatttagagcaagtc
agtgagtattatcagaacagacgatattttaatgagctcatatctctcatggagagtgga
ttaggtttggaacatgcacatatgggcatctttactgagttgggagttctatatgcgaga
taccgtgctgagaagcttatggagcacattaaactgttttcaactcgtctaaatattccc
aagcttatacgagcttgtgatgaacagcagcattggaaggaactaacttacttatatatt
caatatgatgagtttgacaatgctgcaaccactataatgaaccactccccacaagcttgg
gagcacatgcaattcaaagatgttattgttaaagttgcaagtgttgagatttactataag
gctgtgtacttctatttacaagagcatccagatctaatcaatgaccttctaaatgttctt
gccctccgtattgaccatacccatgttgtagacataatgcgaaaagctggtcatctctgt
cttgttaagccatacatggttgcagttcagagcaataatgtatctgctgtgaatgaagct
ctgaatgagatttatgtagaggaggaagaatacgaaaggcttcgtgaatctattgatatg
catgataattttgatctgataggtctagcacagaagattgagaaacatgagcttcttgag
atgagacgtgttgctgctgagatatataagaaggctgggaggtggaagcagtctattgcc
ttgtcaaagaaagacaatctttacaaagatgccatgcaaacatgttcacagtctggtgat
cgggaactttcagaggagttgctcatttactttattgagcagggaaagaaagagtgtttt
gcatcgtgcctatttgtctgttatgatttagtctcgcctgatgttgctcttgagttcgca
tggaggcacaaaatgattgatttttccttcccatatctgttgcagtttattcgagagtac
acaagcaaagtagatgaacttgttaaacataaacttaatgctcttgatgaggtgaaaact
aaagggaaggaggagaaagacattgttgctcagcagaatatgcacgcccaattgctgccg
cttgctttgcctgcaccaccaatgcctggaatgggtggtccagggatgggtgtaagtttt
gttccgccgcaaccaccaccagcaatggatgggatcgggatgcctcctatgcctccatat
ggcatgccactaatgagatctttttga
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integrated database retrieval system