Pistacia vera (pistachio): 116130890
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Entry
116130890 CDS
T07386
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
116130890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116130890
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
116130890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC4
XLF
XRCC4_CC
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
116130890
NCBI-ProteinID:
XP_031272447
LinkDB
All DBs
Position
Unknown
AA seq
257 aa
AA seq
DB search
METTPRHSCLKLQIPNSTEPIFVKGTWYQTHFNLSITDGLNAWLCNATEEEVRERAAQWD
QPVTEYVNLAERYLGFQQPGSVYGFNDASNGYKRLSWTFEKEGTKLEWRWKCEPAPNSKS
VTAGILDFLMDANIRLSDEVVRKTQSFERLKVEAEKSLAQSERLNKEKVEFESAIYTKFL
GVLNSKKAKLRELRDQLSKRDVRNLREEEEESTDETEIFDEVSDDERSEEEAAKAITSTS
KGAPATRACGRKRSTRK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaactccaagacactcgtgtctaaagcttcaaatccccaactccactgaaccc
atcttcgtaaaaggcacatggtatcagacacacttcaacctctccatcaccgacggcctc
aacgcttggctctgcaatgcgacggaagaagaggtgagagagagagcggcgcagtgggac
caaccggtcaccgaatacgtcaatttggccgagcggtatctagggtttcaacagcctggc
tcggtttacggtttcaatgatgctagtaatgggtataaaagattgtcatggacctttgag
aaagaagggacaaagcttgaatggaggtggaaatgtgaacctgcaccaaatagcaagagt
gttacagcaggaattttggactttctgatggatgctaacattaggctcagtgatgaagtt
gtcagaaaaactcaatcttttgagaggctaaaagtggaggctgagaaatctttggctcaa
agtgagagacttaacaaggagaaggtggagtttgaatctgcaatctacacaaagttcctt
ggcgtcctgaattcaaagaaagcaaaacttagagagctccgcgatcagctttcaaaacgg
gatgttaggaatttgcgagaggaggaggaagaatccacagacgaaactgagatttttgat
gaagtgagtgatgatgaaaggagtgaggaagaagctgcaaaggctattacgagcacttcg
aagggtgctccagcaactagggcttgtggtcgaaagaggtctacacgaaaatag
DBGET
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