Pistacia vera (pistachio): 116131605
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Entry
116131605 CDS
T07386
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116131605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116131605
Enzymes [BR:
pvy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
116131605
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
116131605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
HHH_5
Motif
Other DBs
NCBI-GeneID:
116131605
NCBI-ProteinID:
XP_031273120
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MYSLNNPLSKMSKRPKLTPLPPSTPPNPQTLHRLKPTKWAPLNLSQSELSLPLTFPTGQT
FRWKQTAPLQYTGTLGPHLISLKHHQDGGVYYHIHHSPSDSAAKSVLLDFLNVRISLAEL
WGTFSSSDSRFAELAKYFAGARVLRQDPVECLVQFLCSSNNNIGRITKMVDFVSGLGTYL
GEVEGFEFHEFPSLERLAMVTEVELRKAGFGYRAKYITGTVDALQSKPGGGAEWLMSLRK
LELQEAIDALCTLPGVGPKVAACIALFSLDQHHAIPVDTHVWKIATRYLLPELAGARLTP
KLCSRVAEAFVSKYGEYAGWAQTLLFIAELPSQKAILPSNSCTIKEKNSAKRKSREA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtactcattgaacaatcctctctctaaaatgagtaagaggccgaaactcacaccactt
ccaccgtcaactccaccgaatccacaaaccctccaccgtttaaaacctaccaaatgggca
ccactcaatcttagtcagtcggagctctccttacccctcacgttccccacaggccaaacc
ttccgttggaaacaaacagctcctcttcaatacacgggaactctcgggccccacctcatc
tccctcaagcaccaccaagacggcggcgtttattaccacatccaccactccccatccgat
tcagccgccaaatcagttctcctcgattttctcaacgtgcgtatttcactcgccgagctt
tggggaactttttcgtcatccgattctcgttttgctgagctggcgaagtacttcgcgggt
gcccgagttttgaggcaggatccggttgagtgtttggttcagtttctgtgttcatctaat
aataatattgggaggattacgaaaatggtggattttgtgtcgggtttagggacttatttg
ggtgaagttgagggttttgagttccatgaatttccatctttggaaagattagccatggtt
accgaggttgagcttagaaaggctggttttggttacagggccaaatacataactggtaca
gttgatgcattgcaatccaaaccagggggaggtgcagagtggcttatgtctcttcgtaaa
ttggaacttcaagaggcaattgatgctctctgtactttgcctggagttggtcccaaggtg
gcagcatgcatagctctcttctctcttgatcaacatcacgctattcctgttgatactcat
gtttggaagattgctacaagatacctcctccctgaacttgcaggtgcccgcctgacacct
aagctatgtagccgtgtggcagaggcatttgtgagcaaatatggggaatatgcagggtgg
gctcaaactctacttttcattgctgaactaccttcacagaaagccatcctaccatcaaat
tcttgtacaatcaaagagaaaaactctgctaagagaaagagtagagaagcatga
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