Pistacia vera (pistachio): 116131617
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Entry
116131617 CDS
T07386
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03030
DNA replication
pvy03410
Base excision repair
pvy03420
Nucleotide excision repair
pvy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116131617
03410 Base excision repair
116131617
03420 Nucleotide excision repair
116131617
03430 Mismatch repair
116131617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvy03032
]
116131617
03036 Chromosome and associated proteins [BR:
pvy03036
]
116131617
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116131617
DNA replication proteins [BR:
pvy03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116131617
DNA Replication Termination Factors
ELG1-RFC complex
116131617
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116131617
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116131617
Check point factors
HRAD17(Rad24)-RFC complex
116131617
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_lid_RFC1
AAA_22
Rad17
RuvB_N
Mg_chelatase
AAA_11
AAA_16
AAA_5
AAA_14
AAA_assoc_2
nSTAND3
SLFN-g3_helicase
nSTAND_NTPase5
ResIII
AAA_24
AAA_2
PhoH
AAA_28
AAA_19
AAA_7
DNAX_ATPase_lid
AAA_30
AAA_25
RNA_helicase
Parvo_NS1
NPHP3_N
AAA_18
DUF815
bpMoxR
NB-ARC
TIP49
Motif
Other DBs
NCBI-GeneID:
116131617
NCBI-ProteinID:
XP_031273138
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGVYPCPPYKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMT
SRISYICKEEGLNLDAEALSTLSSISQGDLRRAITYLQGAARLYGSSISSKDLISVAGVI
PVEVVEAHFSACRSGDFDVANKEVNNIIAEGYPVSLFLSQLFDLVVEAEDISDEQKARIC
KHFGEADKCLVDGADEYLQLLNVTSHVMRALCNMPEEFHYDA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagtgttgcagagctcgcaaccttgggttgagaaatatcgacctaagcaagtg
aaggatgtggctcaccaggacgaggtggtgcgagtcctcaccaacactctcgagacaact
aattgtccgcatatgctcttttatggcccacctggaactggcaaaaccaccactgcactc
gccatcgcccatcagcttttcggacctgaactctacaaatctagagtactagagctgaat
gctagtgatgaccgtgggatcaatgttgtccgtactaaaatcaaagattttgctgctgtg
gctgtaggttctggtcagcgtcaaggggtttatccttgtcctccatacaagattattatc
cttgatgaggctgattcgatgactgaagatgcccagaatgctctaagacgtacaatggaa
acttactccaaagttacaagattcttttttatttgtaattacatcagcaggatcatagag
ccccttgcttcaagatgtgcaaagtttaggttcaagccactttctgaggaaattatgact
agccgaatatcttatatctgtaaggaagaaggactcaatttggatgcagaggctctatca
actttaagttctatctcacaaggtgatcttcgacgggctattacatacttgcaaggagct
gctcgcttatatggatcatcaatttcttctaaggatctaattagtgtggccggggtcatc
ccagtggaggtagttgaggcacatttttcggcatgcagaagtggtgactttgatgttgca
aacaaggaagttaataacattattgcagagggatatccagtctctctgtttctttcccag
ttatttgatttagttgtggaagctgaagatatatctgatgagcagaaggctcgaatatgc
aaacatttcggtgaagcagacaagtgtttagttgatggcgcggatgagtacttacagcta
ttaaatgtgacaagtcatgtaatgcgagctctgtgtaacatgccagaagagtttcattat
gatgcttag
DBGET
integrated database retrieval system