Pistacia vera (pistachio): 116131628
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Entry
116131628 CDS
T07386
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116131628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvy03021
]
116131628
03036 Chromosome and associated proteins [BR:
pvy03036
]
116131628
Transcription machinery [BR:
pvy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116131628
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116131628
PBAF complex
116131628
GBAF(ncBAF) complex
116131628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
DUF7685
Motif
Other DBs
NCBI-GeneID:
116131628
NCBI-ProteinID:
XP_031273148
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MHMYLFLSGFVISIIFDCLWVLPWADWFSPATVHRLERQVVPHFFSGKSPEHTPEKYMEC
RNYIVAKYMDNPEKRLAVSDCQDLVVGVNNEDLNRIFRFLNHWGIINYCAAAPSPEPWNS
GSYLREDSNGEVHVPSAALKSIDSLIKFDKPMCRLKAAEVYSSSSCHDDDFLDLDNRIRE
RLSENNCNYCSQPIPVVYYQSQKEVDVLLCSDCFHEGRFVIGHSSLDFIRLDPTKDYGDL
DGETWSDQETFLLLEGIEIYNDNWNEIAEHVGTKSKAQCILHFVRLPMEDGLLESIEVPN
LSKPSDSSSRDDTGRLHSTLNGDLPGSCLQEVDLESRLPFANSGNPVMALVAFLASAVGP
RVAAACAHAALATLSEQMEGSGHGNRMNAESVRTREVGFHGDIANSIQQKEENSAHGSWG
QNGVEVSPLPADKVKVAAKAGLSAAATKAKLFADHEEREIQRLSANIINHQLKRLELKLK
QFAEVETLLMRECEQVEKTRQRFAADRARVVSARFGTAGVPSQVNLPSAAPSMVNNNMGN
NRQQVMSASSSQPSIPGYGSSPSQPVHPHMQFRPQQSMFPMGQRMPITSLQASSSSPSNV
MFNTPGNAQPAMNHPMLRSVSGTSSGLG
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcacatgtatttgtttttaagtggatttgtgattagtattatatttgactgtttgtgg
gtcctcccatgggcagattggttctcaccagccacagtacatcgactggagagacaagtg
gtgccacattttttctctggaaaatcaccagaacatacaccagagaaatacatggaatgt
aggaactatattgttgccaagtacatggataatccagagaagaggcttgcagtttctgat
tgccaggatttggtagtaggtgttaacaatgaagatctaaatcgaatttttcggttcctt
aatcactgggggatcattaattactgtgctgctgcaccaagtccagagccttggaatagt
gggtcctatttgagggaggattctaatggtgaggtacatgtgccgtcagccgctttaaag
tccattgatagtttgatcaaatttgacaagcccatgtgtagactcaaggcagctgaagta
tattcatcatcatcatgtcatgatgatgatttcttggacttggacaacagaattcgagag
cgtttgtctgaaaataattgcaattattgttctcagccaattccagttgtgtattatcag
tcacagaaggaggttgatgtacttctatgctctgattgtttccacgaagggagatttgtt
attggtcattcaagcctagattttattaggctggatcctacaaaagattatggtgatcta
gatggagaaacttggagcgatcaagaaacatttttgctacttgagggtatagaaatctac
aatgataattggaatgaaattgcggagcacgttggtaccaagtcaaaagcacaatgcatc
ctccattttgtccgtctacccatggaggatggcctactagaaagtattgaggttcccaac
ttgtccaagccatctgattcatcaagtagagatgatactggaagattacattcaacttta
aatggtgatctaccaggatcatgccttcaagaagttgatttggaaagtcggcttccgttt
gcaaattccgggaatccagttatggccttggttgcttttttggcctctgctgttggaccc
agagttgctgcagcttgtgctcatgcagccttggcaacactgtccgaacagatggaagga
tcgggacatggtaacagaatgaacgcagaaagtgtacgtactagggaagttggttttcat
ggagatattgcaaattcaattcagcaaaaagaagagaactcggcccatggttcgtggggt
caaaatggggtggaggtttctccattacctgcagataaagttaaagtggctgccaaagct
ggtctttctgcggcagcaacaaaggcgaaactatttgcagatcatgaagagcgagaaatt
cagaggctttctgctaatataataaatcatcagctgaagagactggagctgaagttgaaa
cagtttgcagaagtggaaaccttgctaatgagagagtgtgaacaagttgagaagacaagg
cagaggtttgctgcagatcgggcccgtgttgtatcagctcggtttggtactgctggagtc
ccttcacaagtgaatttgccaagcgctgctccttccatggttaacaacaacatgggtaac
aatcgacaacaagtaatgtcagcctcatcttcgcagccaagtattccaggttatggcagc
agccccagccaaccagtccatccccacatgcagtttaggccgcagcagtctatgtttcca
atgggacagaggatgcctataacatctttacaagcatcatcttcatcaccttcaaatgtg
atgttcaacaccccaggtaacgcccagcctgctatgaatcatccgatgctgaggtctgta
tcaggtactagttcaggccttggttga
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