KEGG   Pistacia vera (pistachio): 116131773
Entry
116131773         CDS       T07386                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
pvy  Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvy04121]
    116131773
   03400 DNA repair and recombination proteins [BR:pvy03400]
    116131773
Enzymes [BR:pvy01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     116131773
Ubiquitin system [BR:pvy04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    116131773
DNA repair and recombination proteins [BR:pvy03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    116131773
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4 zf-C3HC4_3 ResIII zf-RING_2 DEAD zf-C3HC4_2 zf-RING_5 zf-rbx1 GatB_N zf-ANAPC11 AAA_34 HDA2-3 Prok-RING_4 zf-RING_UBOX DUF1644
Other DBs
NCBI-GeneID: 116131773
NCBI-ProteinID: XP_031273309
LinkDB
Position
Unknown
AA seq 890 aa
MELKQDLQDQDPIALFMTLDQWQDHDQDPDPDQLSQSSNDSYMLGFVIANIVGLQHYSGT
ISGREMVGLVRQPLNPYDSNAIKVLNTRTLQVGHIERSVASVLSPLIDARMIHVEGIVPN
SRGGGSRYKIPCQVHIFTRLEMFDVVKDEISRGGLQLICDNDVSFGLSEAVVVKEKMEVK
VIRSVDEIFKLVDKNVKKKAKMVAMDPPKEVIKSELFLHQKEGLGWMVHRENSEDLPPFW
EEKDGRFLNVLTNYCTDIRPEPLRGGILADDMGLGKTLTLLSLIAFDKCTGGVSCSGDAN
SLDVTEVEEIGEEGEELCASSAKKRKRGGVRKKGTGRGKKCKMENNSIDGDAKGKSVSFF
DKSSRVSGKKMTLVVCPPSVFSTWITQLEEHTIPGKLKTYMYYGDRTKDIEELKKYDVVL
TTYSTLATEDSWLDSPVKKIEWWRVILDEAHLIKNANAQQSQAVTNLNAKRRWAVTGTPI
QNGSSDLFSLMAFLRFEPFTIKSYWQRLVQRPLTQGSKEGLSRLQVLMSTISLRRTKDKG
LIGLPPKTVETCYVELSGEERELYDEMERMAKGVVQEYISDGSLMRNYSTVLSIVLRLRQ
ICTNLALCPSDLRSILPSNNIEDVSNNPDLLKKLVAVVQDGEDFDCPICISPPADIVITC
CAHIFCRSCILKTIQRTKPCCPLCRHPLSQSDLFSSPPESSDTDNTDNSSSRNSTSSKVS
TLLKLLLALRNQNPSIKSVVFSQFRKMLILLEEPLKAAGFKFLRLDGSMNARRRAEVIEE
FRVPETGGPTVLLASLKASGAGINLAAASRVFLLEPWWNPAVEEQAMDRVHRIGQKEDVK
IVRLIARNSIEERILELQERKKKLAREAFRRKRKDQKEVSVDDLRILMSL
NT seq 2673 nt   +upstreamnt  +downstreamnt
atggaacttaaacaagacctccaagatcaagacccgattgccctcttcatgactctcgac
caatggcaagaccacgaccaagaccccgaccccgaccaactctcccaatcctccaacgac
tcttatatgctcggcttcgttatcgccaacattgtcggcctccagcactactctggcact
atcagcggccgcgaaatggtgggtctggttcgccaacccttgaacccttatgactcaaac
gctatcaaagtcctcaatacgagaacccttcaagtgggtcacattgaacgctctgtggct
tctgttctatctccgctgattgatgctcgaatgattcatgttgaaggtattgttcctaat
tctcgtggtggtggtagtaggtataaaattccttgtcaagttcatatttttactagattg
gagatgtttgatgttgttaaggatgagatttctcgaggtgggttgcagttaatttgtgat
aatgatgtgtctttcgggttgtcggaggcggtggtggtgaaggagaagatggaagtgaag
gttataaggagtgtggatgagatattcaagttggttgataagaatgtgaagaagaaggcc
aaaatggtggctatggatccgccaaaggaggttataaagtctgagctttttctgcaccag
aaggaggggttggggtggatggttcatagggagaattctgaggacttaccgcctttttgg
gaagagaaagatggaagatttttaaatgtgttgactaattattgcactgatattcggcct
gagcctttacgcggtggtattcttgccgatgatatggggttgggtaagactctcactttg
ctttctttgattgcttttgataaatgtactggtggtgttagttgttcaggagatgctaat
agtttagatgtaactgaagttgaggaaattggtgaggaaggtgaggagctatgtgcttca
agtgctaagaaacgtaagaggggtggagtgaggaaaaagggtactggaaggggaaaaaag
tgtaaaatggagaataactctattgatggtgatgctaaaggaaagtctgtgagttttttt
gataagtcttctagagtttcaggtaaaaagatgacattagttgtgtgccctccttcggtg
ttttcgacctggataacacagctagaagagcacactatccctgggaagctgaagacttat
atgtactatggggatagaactaaagacattgaggagctaaagaagtatgatgtagtgttg
acaacttatagtactctggctactgaagattcttggttggattcccctgtgaagaagatt
gagtggtggcgagttattttggatgaggctcacttgattaagaatgcaaatgctcaacaa
agccaggcagtcactaatttgaatgctaagaggaggtgggccgttactggtacacctatc
cagaatggctcatctgatttgttctcattaatggcttttttgcggtttgagccatttact
attaagagctattggcaaagattagtacaacgtcctctcacacagggtagtaaggagggg
ctctcacgtctgcaggttctaatgtcaaccatttctttaaggagaacaaaagacaagggt
ttgattggattgccaccaaaaactgtagaaacgtgttatgttgaactttctggggaagaa
cgtgaattgtatgatgagatggaaagaatggccaagggtgttgtccaggagtatataagt
gatggtagtctaatgcgcaactattcaactgttcttagtatagttttacgacttcgtcag
atctgtacaaacttggctttgtgcccatcagatctgagatcaatacttccttccaacaac
attgaagatgtatccaataacccagacttgctgaaaaagctggttgcagtggtacaagat
ggtgaagattttgactgtccaatttgcatctctcctcctgctgacattgtaattacatgt
tgtgctcacatcttttgccgatcctgcatcctaaaaaccatacagcgcacaaaaccctgc
tgccccctttgtcgccatcctttatcacaatctgacctgttctcttcacccccagaatca
tctgacactgacaatactgataactcttcttctagaaattccacctcttcaaaagtgtcc
actctattaaagctactccttgcactaaggaaccaaaacccttctataaagtcggttgta
ttttcacaattccgtaaaatgttgatattgcttgaagagccattaaaagcagctggtttc
aagttcctacgcctagatggttcaatgaatgcaagaaggagagctgaagtaatcgaagag
tttagagttccagaaacaggtggaccaactgttttgctggcgagtcttaaggcttcaggt
gcgggtatcaaccttgcagctgcttctcgagtcttcttgttggagccatggtggaaccca
gcagttgaggaacaggctatggacagggtacaccgtattggtcaaaaggaagacgtgaag
attgtgaggctgattgctcgaaacagtattgaagagaggatactagagttgcaggaaagg
aagaagaaactggcaagggaagcttttagaagaaagagaaaggaccaaaaggaggtcagc
gtagatgatctacgcattctcatgtcgctgtaa

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