Pistacia vera (pistachio): 116132581
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Entry
116132581 CDS
T07386
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116132581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116132581
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116132581
mRNA degradation factors
5'-3' decay
Lsm complex
116132581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
116132581
NCBI-ProteinID:
XP_031274103
LinkDB
All DBs
Position
Unknown
AA seq
141 aa
AA seq
DB search
MVLDAFVVSLDTLTVGQSTHCILSAPYPFICLAEKILVLLRDGRKLLGLLRSFDQFANVV
LEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSTAEIKRAQKA
EKDATVLKGSMRKRMEFLDFD
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atggttttggatgcatttgttgtttccctggatactttgactgtaggacagtcaactcat
tgcatattgtctgctccttacccttttatatgccttgcagaaaaaattcttgtcttgctg
cgtgatggtcgaaagctcttgggcctactccgttcctttgatcaatttgctaatgttgtt
cttgaaggtgcttgtgagcgaattattgttggagatctttactgtgacattcccttaggt
ctatatgtaatccgtggggagaatgttgttttaattggagagctggatttagaaaaggag
gagcttcccccgcatatgactcgtgtatcaacagcagaaataaaaagagctcagaaagca
gaaaaggatgctactgttttaaagggctccatgagaaaaagaatggagttccttgatttt
gattaa
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integrated database retrieval system