Pistacia vera (pistachio): 116132958
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Entry
116132958 CDS
T07386
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvy03041
]
116132958
Spliceosome [BR:
pvy03041
]
Common components
Common spliceosomal components
General mRNP proteins
116132958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
116132958
NCBI-ProteinID:
XP_031274485
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MEFDEYEYLEKTVEEQQPPKEDDSSSAKKKAKREGAEKSERSYRKREDSEEEEEERVKSS
KRSRHEDEENGGRREREREKERDRDRERDKDRSRRDREKERDSDRDRERSRDKEKERREK
DRDREKERERRERREREKEKEKEKDKEKEIEMDKESEKEKERERERDRERRSSSRSRRSS
SRSRRDSEREREREREKEREREREIRERERDLEMRESRRYKEKKEVVEPEADPERDQRTV
FAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSG
QLLLGQPVMVKPSEAEKNLVQSNASAGGTTTGPYGAIDRKLYVGNLHFNMTEMQLRQLFE
PFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIAGRTIKVSSVTDHV
GAQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVPMVNGSAANQQ
SVSLPVIGQSAVPIPAVTAPVIPAPVSEFIGYPSECLLLKNMFDPVTETDPDFDLEIQGD
VEEECSKYGRVIHIHVDKNSAGFVYLRFESVEAAAAAQRAMHMRWFARRLISAIFMKPQD
YEDKFKG
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgacgagtacgagtatttggagaaaacagtggaggagcaacagccgccgaag
gaggacgactcgtcgtcggcgaagaagaaggccaagcgagaaggagcagagaagagtgag
cggagttatcggaagagagaggatagtgaagaggaggaggaggagcgggtgaagagtagt
aagagatcgcgacacgaggatgaggagaacggcgggaggagagagagggagagagagaaa
gagagggatagagatagagagcgggataaggatcggagcaggagagatcgggagaaggag
agggacagtgatagagatcgggagaggagtcgagacaaggagaaggagaggagagagaag
gacagggacagagagaaggagagggagagaagagagaggagggagagagagaaggagaag
gagaaggagaaggataaggagaaggagattgagatggataaggagagtgagaaggagaag
gagagggagagggagagagatagagagaggaggagtagtagtaggtcgaggagaagtagt
agtcggtcgaggagagacagtgaacgcgaacgtgaacgcgaacgcgagaaggagagggag
agagagagggagattagggagagggagcgtgatcttgaaatgcgagagagcaggagatat
aaagaaaagaaagaagtggtggagcctgaagctgatccagagagggatcaaagaactgtt
ttcgcttatcagatgcctctgaaggcgactgaaagagatgtttatgagttcttctcaaaa
gcgggcaaggtgagggatgttcgactgatcatggatcggaattcaaggcggtcaaaagga
gttgggtatattgaattttatgatgtgatgtccgtgccaatggcaatagctttgtctggc
caactacttcttggacaacctgtaatggttaagccttctgaagctgaaaagaatcttgtt
caatctaatgcttctgctgggggcaccaccactggaccgtatggagcaatcgatagaaag
ctttatgtgggaaatttacactttaacatgactgagatgcagcttagacagctttttgaa
ccgtttggccctgttgagcttgtgcaacttcctcttgacattgaaacagggcagtgcaaa
ggttttgggtttgttcagtttgctcagcttgagcatgcaaaggcagctcaaagtgctctg
aatggaaaattggagattgctggtcggactattaaggtctcatctgttacagatcatgtt
ggagcccaggatactgcagcaaaatctgcggactttgatgatgatgatggtggtgggctg
gctttaaatgctcagtcaagagcattgcttatgcagaagctggatcgcactggcatagcc
acaagtatcgcaggctcactcggagtgccaatggtaaatgggtctgctgcaaatcaacaa
tccgtgagcttgcctgtcattgggcaatctgcagttcctattcctgctgttacagctcca
gttattcctgctccagtctctgaatttattggatatccaagcgagtgtttactgttgaag
aatatgtttgatcctgttacagagacggacccagattttgatttggaaatacaaggagat
gtggaagaagaatgttccaaatatggccgggtgatacatatacatgtggacaagaacagc
gctggttttgtatatctacggtttgaatctgtggaagcagcggcagctgctcaacgagcg
atgcatatgagatggtttgcacgcagattgatttcagccatattcatgaaaccacaggat
tatgaagacaagttcaaaggctga
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