Pistacia vera (pistachio): 116133067
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Entry
116133067 CDS
T07386
Name
(RefSeq) LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3-like 2
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvy03036
]
116133067
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
116133067
REST complex
116133067
Heterochromatin formation proteins
Other heterochromatin formation proteins
116133067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
116133067
NCBI-ProteinID:
XP_031274590
LinkDB
All DBs
Position
Unknown
AA seq
1420 aa
AA seq
DB search
MKRIREDLFGGSAQFKRPFAASRGESYVQSQLPGAGGVVGGGGSGGSGGGGGGVVGVGGP
AVAVGVGASPKLTTNDALTYLKEVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVK
DLFKGHNNLIFGFNTFLPKGYEITLDEDDAPPKKTVEFEEAISFVNKIKKRFQNDEHVYK
SFLEILNMYRKEHKDIHEVYSEVAALFEDHTDLLEEFTRFLPDTSATSLTHQVPYARNSA
QRGNERSSAIPALRQMHVDKQRRRDRIITSHDRDLSVDRPEMEDDKVVLKLQKEQRKRAE
KENNRRNRDQDDREMEHDNNRDFNSQRFSDKKKPSRKVEGFGANSNFASYDDKDNLKGMY
NQGFIFCDKVKEKLCSDDYQAFLKCLHIFNNGIIKRNDLQNLVTDLLGKYPDLMAEFNYF
FESCENIDGFLARVMSKVCKTFDGHVSRALKVKDKEREQKRENEVAKENGYREKYYAKSI
QELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRN
QYEESLFRCEDDRFELDMLLESVSSTAKRAEELLTLINENKINLEAPFHIKDHFNALNLR
CIERLYGDHGLDVMDILRKNPALALPVILTRLKQKQDEWTRCRSDFNKVWAEIYAKNHYK
SLDHRSFYFKQQDSKNLSTKSLVAEIKELKENKLAEDNVLFAIAAGHRQPVIPHLEYGYS
DLSIHEDLYKLVQYSCEEMCSTKEQVNKAMKLWTTFLEPMLGVPSRPNGMDGADGVGKGR
HAANNSASSIVESDGSPVPDSSPGPDGALVNSRQPKSSTTIDGDEHTPAELNNLSRSNMA
NGNTLAKESCLDMDRVCRDDLTSSSLQQEKERKDVEITDKRSGFSMQLTSGERAANSNAP
HAVVAENIHGRSGVEVTSGCGATHLGHSDNTSEDHKPSSTVDPVPPSEGVDLTKPALMAN
GVFKDGAKVSKYREESIGPSKIEKEEGELSPNGDFEEDNFGVYRDTGMKAMPKAKQGVES
RQYKAANEEGLRSQNAGGENDADADDEDSENASEAGDEASGSESAGDECSREEHEEEEDA
EHDEADGKAESEGEADGLADQHFVGGDSMSLPFSECFLLSVKPLAKYVPAASLDEDRKSC
QVFYGNDDFYVLFRLHQTLYERIQSAKTNSTTAELKWRAKDASCPDLYARFMTALYNLLD
GSADNAKFEDECRAIIGNQSYMLFTLDKLLYRLCKQLQTVAADEMDNKLLQLYEYEKFRK
PGKLIDSVYHENARVLLHEENIYRMKFSSSPSRLSIQLMDNVIEKPEAFAVSMDPNFAAY
LLNDFLSAFPGKKEPHGIALQRNKRKYASLDESSATCMAMEDVQLVNGLECRIACNSYKI
TYVLDTEDFFYRKKRSSPQTRSSYQNQARTERFHRFLSAS
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaatacgagaggatcttttcggtgggagtgcacaatttaagcggccctttgct
gcttctcgcggggaatcctatgtgcaatcgcaactgcctggggctggaggggttgttggc
ggtggcggcagtggtggcagcggaggtggagggggaggagtggtaggagtaggaggacca
gcagtggctgtgggagttggtgcgtcgccgaaactaacaacgaatgatgcattgacctat
ctcaaggaggttaaggacatgtttcaagaccaaagggaaaaatatgatttattcctggaa
gtcatgaaagattttaaggctcagagaaccgacactgctggtgtcattgcgagggtgaag
gatttatttaaaggacacaacaacttaatttttggatttaacacattcttgccaaaggga
tatgaaataacccttgatgaggacgatgctccaccaaagaaaactgttgaatttgaagaa
gcaattagttttgtaaacaagataaagaaacgtttccaaaatgatgaacatgtctataaa
tcattcttggaaattctgaatatgtataggaaagagcacaaagatatacatgaggtctac
agtgaggttgctgctctttttgaggaccacacagatcttcttgaggaattcaccagattt
ttacctgatacttcggcgacttctttaactcaccaggtaccatatgcccgaaattcagca
cagcgtggcaatgagcgaagctctgccattcccgctttgcggcaaatgcatgtggacaag
caacgtcgtcgagatagaattattacttcccatgatcgtgatcttagtgttgatcgtcct
gagatggaggatgacaaagtagtgctgaaattgcagaaggagcagaggaagcgtgcagag
aaagaaaataataggagaaatcgtgatcaagatgatagagaaatggagcacgataacaat
agggacttcaactcgcaacgtttttctgacaaaaagaagccttccaggaaagttgaaggt
tttggagcaaattctaactttgcttcttatgatgacaaagataacttaaagggcatgtac
aaccaagggttcatcttctgcgacaaagtcaaggagaagttgtgttcagatgattatcaa
gcattcttaaagtgtctccatatttttaacaatggaattatcaaaaggaatgatctacaa
aatttggttactgatttacttggaaagtatccagatcttatggctgagttcaattatttc
ttcgagagttgtgagaatattgatggattccttgctcgtgtgatgagtaaagtatgtaaa
acgtttgatgggcatgtatctagagctttaaaggtaaaggacaaagaaagagaacagaaa
cgtgaaaatgaagtagctaaagaaaatggatacagggaaaagtattatgcaaaatcaatt
caagagcttgacctttctaactgtcaacgttgtacacccagctatcggcttctaccagat
gattatccaataccttctgctagccagagatcagagcttggtgctcaagtgctgaatgat
cactgggtctctgtgacttcaggaagtgaagattactcttttaaacatatgcgcagaaac
caatacgaagaaagcttgttcagatgtgaagatgatagatttgagctggacatgctgtta
gaatctgtgagctcaactgctaagcgcgcagaagaattgttgactctcatcaatgaaaat
aagatcaatctggaggcccccttccatataaaggaccactttaacgctctaaatttaagg
tgtattgagcgtttgtatggtgatcatggtcttgatgtgatggacatattgcgcaaaaat
ccagctcttgcactaccagttatcttaactcgtctgaagcagaaacaagatgaatggact
cggtgtcgttcagattttaacaaggtttgggctgaaatatatgctaaaaaccattacaaa
tcgcttgatcatcgcagtttctacttcaagcaacaagattcaaagaacttgagcacaaaa
tctttggtggctgaaattaaggagttgaaagagaataagctggctgaggacaatgtactt
tttgctattgctgctggtcaccggcaacctgtaattccacacctggaatatggatactct
gacctcagcattcatgaagatttgtataaacttgttcagtattcatgtgaagagatgtgc
tcgaccaaggaacaggtgaataaggctatgaagctttggactaccttcttggaaccaatg
cttggtgttccatctcgacctaatggtatggatggtgctgatggtgttggaaaaggtagg
catgcagcaaataacagtgcatcaagcatagtggaaagtgatggaagtcctgtgcctgat
agtagtcctgggcctgatggtgctctagtgaattctaggcaaccaaaatcttctaccact
atagatggagatgaacacactccggcagaactaaataatttaagcaggagtaatatggct
aacgggaatactttagccaaagaaagttgtttggatatggatcgtgtctgtagagatgat
ctgacctctagttctcttcagcaagagaaagaacgtaaggatgtagaaattacagataaa
aggtctggatttagcatgcagcttacttctggtgaacgagcagcaaattccaatgcacca
catgcagttgttgctgaaaatattcatggcagaagtggcgttgaagtgacttcagggtgt
ggtgcaactcatttgggacatagtgataatactagtgaggatcataagcctagctctact
gttgatccagtccctccatcagagggcgttgatcttacaaaaccagctttaatggcaaat
ggagtttttaaagatggtgctaaagttagtaaatatcgtgaagaatctattgggccttcc
aaaattgaaaaagaagagggtgaattatcacctaatggtgattttgaggaggataatttc
ggtgtctatagagatactggtatgaaggctatgcctaaggcaaaacaaggcgttgaaagc
aggcaatataaggctgcaaatgaagaaggattgcgttctcagaatgctggaggagaaaat
gatgcagatgctgatgatgaggacagtgaaaatgcttctgaggctggtgatgaagcctca
ggtagtgagtctgcaggtgatgagtgctccagggaagagcatgaagaggaggaagatgca
gaacatgatgaagctgatggcaaggcagagagtgaaggtgaagcagatgggttggctgat
cagcattttgtgggaggtgatagcatgtcgttgcctttctcagaatgctttcttttgtca
gttaagcctcttgcaaagtatgtaccagcagcttcacttgatgaagacaggaaaagttgt
caagttttttatggaaatgatgatttttatgtgcttttcaggttgcatcaaactctatat
gaaagaattcaatcagcaaaaacaaactcaacgactgctgaattgaaatggagagctaag
gatgctagttgcccagatctttatgctagattcatgaccgcactgtacaatttgcttgat
ggatctgctgataatgcgaagtttgaggatgaatgtcgagctattattggaaatcagtca
tatatgttatttaccttagacaagttactgtatagattgtgtaaacagcttcaaactgtt
gcagctgatgagatggataataagcttcttcaactgtatgagtatgaaaaattcaggaaa
cctgggaagctaattgattcagtttatcacgaaaatgcccgtgtcctccttcacgaggag
aacatataccgaatgaaattttcatcttccccatcacgtttgtctatccagctgatggac
aatgtgattgaaaagccagaggcatttgcagtttccatggatcctaattttgcagcttat
ctgcttaatgattttttgtctgcctttcctggcaagaaagagccacatggcattgcactc
cagagaaacaagcgtaaatatgcaagcctagatgaatcttctgctacatgtatggccatg
gaagatgttcaattggttaatggtctggagtgcaggatagcttgcaactcttacaagatc
acgtatgttctggacacggaagatttcttctatcgcaagaaaagaagttcaccgcaaacc
agatcttcatatcaaaatcaggcaagaacagaaaggtttcacagatttttatctgcctca
taa
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