KEGG   Pistacia vera (pistachio): 116133072
Entry
116133072         CDS       T07386                                 
Name
(RefSeq) DNA repair endonuclease UVH1-like
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03420  Nucleotide excision repair
pvy03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    116133072
   03460 Fanconi anemia pathway
    116133072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvy03032]
    116133072
   03400 DNA repair and recombination proteins [BR:pvy03400]
    116133072
DNA replication proteins [BR:pvy03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    116133072
DNA repair and recombination proteins [BR:pvy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     116133072
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 116133072
NCBI-ProteinID: XP_031274594
LinkDB
Position
Unknown
AA seq 943 aa
MLQKLPPPPPTPTPTPTLTFAQKMVLGFHEHIITELLAEGSGGLVILSSGLSLPKLISSL
LLLHSPSQGTLLLLSSSSSLKSQIFHFLSPHSPNQLPSEITADLSASHRHSLYSSGQIFF
ITARILIVDLLTQKLPTSHIAGIVILNTHALSDSSTETFICRIVKSFNKKAYIRAFSDKP
TAMVSGFSKTERIMKSLFIRKLHLWPRFQVNVSEELERNPPVVVDIRVPMTKYMVGIQKA
VLEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEIIRRQLDPIWHILGKKTRQLVSDLK
TLRKLLDYLVRYDAVSFLKYLDTLRVSESFRSVWIFSESSYKIFDYAKKRVYRFMRSDGV
KSEGQSKSMTGKKRKLKGAENNENEADSGTSSLSTNNGVVLEEVLEEAPKWKVLREVLEE
IEEERQKQASSKEEVLHEDEESDHSIVLVVCKDERSCMQLEDCIMNGSQKVMREEWEKYL
LSKVELRTVQISNKKKKPKEPKGYGILDGGVPVTPAQNAEASSVCKQEHDALLAAASEIR
NQGISDDVSGDDPDTQVGSRGHGKGRGKGKNKKGPANVWQSKNGVNKSNNKTATEEKPEI
SGSGNEGQADESRSGATNGYSEDTVKSAFVGKGVLRKHTQKVDTTRSKDSKQLPLVHFYA
LESSQPVLDVLKPAVVVVYHPDMSFVREIEVYKAENPSINLKVYFLFYEESTEVQKFEAS
IRRENSAFESLIRQKSLMMIPVDQDGHCLGLSSSLEAQATSSQNAMTRKAGGRKEVEKEM
QVIVDMREFMSSLPNVLHQKGMRVIPVTLEVGDYILSPLICVERKSIQDLFTSFTSGRLY
HQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPHNIISKLSLLVLHFPRLRIIW
SRGLHATAEIFASLKANQDEPDEAKAIRVGVPSEEGVVENDVR
NT seq 2832 nt   +upstreamnt  +downstreamnt
atgttacaaaagcttcccccgccaccgccaacgccaacgccaacgccaacgctaaccttt
gctcaaaaaatggtgcttggatttcatgaacacataatcacagagctcctagcggagggt
agtggaggtctagtgattctctcctccggcctttccctcccgaaactcatctcttctctt
ctcctcctccactctccttcccaaggtactctcctccttctttcttcctcttcttctctc
aagtcccaaattttccacttcctctctcctcactcaccaaatcaactcccctccgaaatc
accgccgatctctccgcctcccatcgccactccctctactcctccggccaaatctttttc
atcactgccagaattctcatcgtcgaccttttgacccaaaagttaccaacttctcatatc
gccggtattgtcattctcaacacccatgccctttctgattcctccactgaaacttttatt
tgtagaattgtcaaatccttcaacaagaaagcctatatccgcgccttttctgataaaccc
actgctatggtttctggtttttccaagactgagaggataatgaagagtttgttcatcagg
aagcttcatttgtggcccagatttcaagtgaatgtgtccgaggagctggagaggaaccca
ccggtggtggtggatataagggtgcccatgactaaatatatggtggggatacagaaagct
gttctggaagtcatggatgcttgtttgaaggagatgaggaagactaataaggttgatgtg
gaggatctgacggtggagaatggcttgttcaaatcgtttgatgaaattattaggaggcaa
ctggatcccatttggcatatcttggggaagaagaccaggcagttggtttctgatttgaag
actttaaggaagttgttggactatcttgttaggtacgatgctgtcagttttttgaagtat
ttggatacactgagggtatcagagagtttccggtctgtttggatattttcagagtccagc
tataagatatttgactatgcaaagaagcgtgtttatcgctttatgaggtcagatggtgta
aaatcggaagggcaaagtaagagcatgacggggaaaaagagaaaattgaagggagctgaa
aataatgaaaacgaagcagattctggtacttcatctttgagtacaaataatggggtagtt
ctggaggaagttctggaggaggcaccaaagtggaaggtgttacgtgaggtccttgaagag
atagaagaggaaagacaaaagcaagcttcatcaaaggaagaagttttgcatgaggatgaa
gaaagtgaccatagcattgtcctggtggtgtgcaaagatgaacgctcatgcatgcagctt
gaagattgcatcatgaatggctcacaaaaggtcatgcgggaagaatgggaaaaatatttg
ttgagcaaagtagagctgcgtactgtgcaaatatctaataagaaaaagaaaccaaaagag
cccaaaggttatggaattcttgatggaggtgttcctgttacacctgcgcagaatgcagaa
gctagcagtgtatgcaaacaggaacatgatgcactgttggcagcagcatctgaaataagg
aatcaaggtataagtgatgatgtttctggtgatgatcctgatactcaggttggcagcaga
ggacacggaaaaggacgtggaaaaggaaaaaacaaaaaaggcccagcaaatgtttggcag
tccaaaaatggagtgaataaaagtaacaacaaaacagcaacagaagaaaaacctgaaata
tctggttcaggaaatgaaggccaagcagatgaaagtcggtcaggggccacaaatggttac
tctgaagatacagtcaagagtgcatttgttggcaaaggtgttctgcggaagcatactcaa
aaggttgatactacaagatccaaagattctaagcaacttccactggtgcacttttatgca
ctagaaagcagccagcctgtacttgatgttctgaaacccgctgtagttgttgtttaccat
ccagacatgagttttgtcagagaaattgaagtctacaaagctgagaatccttcaattaac
ttgaaagtttattttctcttctatgaagagtccactgaggtccaaaaatttgaagcaagc
atacggagggagaacagtgcttttgaatcattgatcagacagaaatcattgatgatgatc
ccagttgatcaggatggacactgcctgggattgagttcttcattagaggcacaagctaca
tcttcccaaaatgcaatgactagaaaggcaggtggaagaaaggaggttgagaaagaaatg
caggttattgtggacatgagagagttcatgagtagccttcctaatgttcttcaccagaag
ggcatgcgcgttatacctgtgactttggaagttggggattatattctgtcaccactaata
tgtgtagagaggaagagtatccaagatctatttacaagctttacatctggccgcctttac
caccaagtggaaacaatggtgcgctattacagaatacctgttcttctgattgagttttca
caagacaaaagcttttcttttcagtctgcaagtgatattggtgatgatgtgacaccacat
aatatcatatccaagttgtcactgcttgttctacattttcctcgcttacgaatcatttgg
tctcgcggtttgcatgcaactgctgaaatatttgcttcactaaaagcaaatcaggatgaa
cctgatgaggcaaaagcaattagagttggtgtgccgtcagaagagggtgttgtggaaaat
gatgtgaggtaa

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