Pistacia vera (pistachio): 116133227
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Entry
116133227 CDS
T07386
Name
(RefSeq) protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvy03021
]
116133227
Transcription machinery [BR:
pvy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
116133227
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
116133227
NCBI-ProteinID:
XP_031274782
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MADLENLLLEAAGRTNNSGRNRHSAPPSRRRREGSYSGSDSRDDDSDDDRGYASRKPSGS
QVPLKKRLEAAERDEDQGSQEEGDFDDGGSGREGDSSNESDDDNHAQMTELEREMMIFER
DDKKVDKNLRDKFRSRREERSTRSRKETPPLPSSRGVRLSTRSADRAAAKDDALNELRAK
RLKQQDPEAHRRLRDASRGSSGNRGLSPIKRKTFTPASLSSSSQSEGESRSHSEDEGSTG
DGGMADSDDERGMTGSGGPTFEDIKEITIKRSKLAKWFMEPFFEELIVGCFVRVGIGRSK
SGPIYRLCMVRNVDATEPDRLYKLESKTTYKYLNVTWGDERSAARWQMAMVSDSAPLEEE
FKQWVREVERSGGRMPSKQDVLEKKEAIQKTNTFVYSAATVKQMLQEKKSASSRPLNIAA
EKDRLRRELEVAQSRHDEVEVERIKKRLQQLEASRESKVKDAKAIRLAEMNRKNRVENFK
NASGLKPLNTSLKAGEAGYDPFSRRWTRSRNYYVSKPDEGDTAAVTNGDSNDPSAAAVIN
GEGAGAGMAATAAALEAAAGAGKLVDTSAPVDQGTESNVLHDFELDISLNTLKKFGGPQG
ALAGFMSRKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttagagaacttgcttctggaggcagctggaagaacaaataattctggaagg
aaccgtcattctgctcctccctccagaaggcggcgtgagggttcatattctggaagtgac
tctagggatgatgattcagatgatgatcgtgggtatgctagcagaaagccctctggatct
caagttcctttgaagaagaggctggaagctgctgaaagagatgaagatcagggtagccag
gaagaaggcgattttgatgatggtggttcaggtcgtgaaggtgacagcagcaatgaatct
gatgatgataaccatgcacagatgactgaacttgaaagagagatgatgatatttgaaaga
gatgataagaaagttgataagaatttaagggataagtttagatcaaggcgggaagagagg
tccacccgatcaagaaaagagacccctccccttccatcatctcgaggtgtgcgcctttca
actagatctgctgatcgggcagctgcaaaggatgatgcattgaatgagctgagagcaaaa
cggttgaagcagcaggacccagaggctcaccggaggttgagggatgcatctcgaggcagt
tcaggaaacaggggtttatcaccaatcaagcgaaaaacatttactcctgcaagtctgagt
agctccagccagagtgagggtgaaagtaggtctcacagtgaagatgaaggatctacaggg
gatggtggaatggctgacagtgatgacgaaaggggcatgactggttcagggggaccaact
tttgaagacataaaggaaatcactatcaagaggtcaaaacttgcaaagtggttcatggaa
ccgttcttcgaggagttgatagtgggttgctttgttagggttgggattggcaggtctaag
agtgggcctatttataggctctgcatggtccgaaatgtcgatgctacagagcctgaccgg
ttatacaagctagagagcaagacaacatacaagtatctcaatgtcacctggggcgatgaa
aggtctgctgcccggtggcagatggctatggtttcagactctgctccacttgaggaagag
tttaaacagtgggttagagaggtggagagaagtggtggccgaatgccaagcaaacaggat
gtgttggaaaaaaaggaggctatacaaaaaactaatacgtttgtctattcagcagccact
gtaaagcagatgttgcaagagaaaaaatctgcctcatcacggccattaaacattgctgct
gagaaggaccgacttaggagggagttggaagttgctcaaagtaggcatgatgaagtagaa
gtggagaggatcaagaaaagattgcagcaactggaggcatcgcgggaatcaaaggtaaaa
gatgctaaagctattaggcttgctgagatgaataggaaaaacagagttgagaacttcaaa
aatgcatctggactgaagcccttaaatacaagtttgaaagcaggagaggcagggtatgat
ccattttcaagaaggtggacaaggtcaagaaattactatgtttctaagccggatgaagga
gacacagctgcagtgacaaatggtgacagtaatgatccatcagcagctgcagtaattaat
ggggaaggggcaggggctggcatggcagctacagcagcagccttggaagctgcagctggt
gcggggaagttggttgatactagtgctcctgttgatcaaggaacggagtcaaatgtgctg
catgattttgagcttgatatctctttgaatacgcttaaaaaatttggtgggcctcaggga
gctctggctggattcatgtcaaggaagcaaaggatagaagcaacagttggatgtcgtgtg
ccagagaatgatggaaggagacacgctttgaccttgacagtaagtgattacaagagaaga
agagggcttctctga
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