Pistacia vera (pistachio): 116133383
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Entry
116133383 CDS
T07386
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy00040
Pentose and glucuronate interconversions
pvy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116133383
Enzymes [BR:
pvy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116133383
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
116133383
NCBI-ProteinID:
XP_031274945
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MGGNINARCRFPSSHFLLLLFSFQKSHHKQSSSTSEIFLYCCISLCLTRPTHCNKLLSAF
NWDAISSCFYCHSHFSIPKVVLNVIDSCWRWKSNWATNRQALADCAVGFGKGAIGGKYGA
IYVVTSPADDPVKPKFGTLRYGVIQTKPLWIIFAKDMVIRLKNELIMTSYKTIDGRGAKV
EIGNGPCITIQDVNHVIIHGISIHDCKPGKAGLVRSSTTHVGRRGGSDGDAIDIFASSNI
WIDHCFLARSADGLIDVIHASTAVTISNNYFSQHDKVMLLGHNDKFTADKVMKVTIVFNR
FGEGLIERMPRVRIGYAHVANNRYDEWKMYAIGGSANPTILSEGNYFAAPNDSNSKQVTK
REAKNGWKNWKWRTSKDVFINGAYFVPSGYGSCAPNYSKAQSFIVAPGEMVPALTASAGP
LRCVVGKAC
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaaacattaatgcaaggtgcaggtttcccagttctcattttcttctactgctt
ttcagctttcaaaaatcccaccacaaacagtcttcaagcacatccgagatcttcctttat
tgttgtatcagcttatgcctcactaggcctactcactgcaacaaattgctttctgctttc
aattgggatgctatatcttcctgtttctactgtcactctcatttcagcatcccaaaggtt
gtcttgaatgtaatagactcatgctggcgttggaaatccaattgggcgactaatcgtcaa
gctttggcggattgcgcggtggggttcggaaaaggggccatcggaggaaaatatggtgca
atatatgtagttaccagtcctgctgacgaccctgtaaaacctaaattcggaaccctgaga
tatggcgttatccagacaaaaccgctttggattattttcgcgaaggacatggttattcgg
ctaaaaaatgagcttataatgactagttataagactattgatgggagaggggctaaagtg
gagattggtaatggaccatgcataactatacaagatgttaaccatgtgatcattcatgga
atcagcattcatgattgtaaaccagggaaagctggccttgttaggagtagtactacacat
gtcgggcgtcgaggcggctcggacggcgacgccattgatatctttgcatcttcaaatatc
tggattgaccattgctttcttgctcgtagtgctgatggcctaatcgatgtcattcatgct
tcaactgcggtcaccatctctaacaattacttctctcaacatgacaaagtgatgctgctt
ggacacaacgataagtttactgcagataaagtaatgaaagttacaatagtcttcaaccga
tttggggagggactcatcgagaggatgccaagggtgaggataggctacgcccacgttgca
aacaacagatatgacgagtggaaaatgtatgcaattggtggcagtgctaatccaaccatt
ttaagtgaaggcaattactttgcagctccgaatgattctaactccaaacaggttactaag
agagaggctaaaaatggttggaaaaattggaaatggaggacctctaaggatgtatttata
aatggggcgtattttgtgccatcaggatatggaagttgtgcgccaaattactccaaagct
caatcgtttattgttgcaccaggagaaatggttcctgctttaacagctagtgcaggtcct
ctgcgttgtgttgttgggaaagcatgttga
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