Pistacia vera (pistachio): 116133423
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Entry
116133423 CDS
T07386
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
116133423
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Paralog
GFIT
Motif
Pfam:
FAD_binding_7
Cryptochrome_C
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
116133423
NCBI-ProteinID:
XP_031274986
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All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFLWAPEEEGPYYPGRVSRWWLKHSL
AHLDSSLRSLGTCLITKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKELLT
AQGIAVRTFNADLLYEPWEINDAQGRPFMTFAAFWERCLSMPYDPDSPLLPPKRIISGDI
CRCPSDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT
SLLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNH
PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREIDRIDNPQFEGYKFD
PNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVSIDAAKARLQEA
LTDMWQQEAASRAAIENGTEEGLGDSSEAAPIAFPEDIQMEENHEPARNNPPTTIRCYED
QMVPSMTTSLVRVEEEESSSDLRNSAENSRAEVPRNVNVNVNQEPRRDTLNQGVLPTVRN
NHPLPQFNITGGLGNAEDSTAESSSTSRRERDGGVVPVWSPSTSSYSEQLVGDENGIGTS
SSYLQRHPQSHQIMNCRRLSQTG
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggtggttgtagtatagtttggtttaggagagatctaagagttgaagataat
ccagcactcgcagccggtgtgagggctggtgctgttgttgcagtttttctatgggctcct
gaggaagagggtccttattatccagggagggtgtctaggtggtggctcaagcacagtttg
gctcatcttgattcttctttgaggagccttggtacttgtctcatcaccaagagatccact
gacagtgtttcttctcttcttgaggttgttaaagcaactggtgctactcagctcttcttc
aaccatttatatgaccccttgtcgctggtaagggatcaccgtgcaaaggagctcttaact
gcacaaggcatagctgtgcgcacgtttaatgcggatctgctctatgaaccatgggagata
aatgatgcacaaggccgccctttcatgacatttgctgcattctgggagagatgccttagt
atgccttacgaccctgattctccacttctcccacctaagaggataatttcaggtgatata
tgtaggtgcccttcagatacattagtgtttgaagatgaatcagagaaagggagcaatgct
cttcttgcacgagcatggtcgcctgggtggagcaatgctgataaggctctcaccacattt
attaatgggcctttaattgaatactctaagaatcggagaaaggctgatagtgccacaacc
tcacttctttcaccgcacctgcattttggggaggtgagtgtgagaaaagtcttccatctt
gtccgcatcaagcaggtttcctgggccaatgaagggaacaaggctggtgatgagagtgtg
aacttgtttctcaagtcaattggtcttcgggaatattcaagatatatgagttttaaccat
ccttacagtcatgaaaggcctctccttgggcaccttaagttctttccttgggttgttgat
gaaggctattttaaggcatggagacaaggtagaactggctatccactggtggatgctggc
atgagagagttgtgggccactggctggcttcatgatcggatacgagttgtagtttctagt
ttctttgtaaaggttcttcagcttccatggagatggggaatgaagtatttctgggatacc
cttttggatgcagatttagagagtgatgctcttggttggcagtacatatctggcactctt
cctgatggccgtgaaattgaccggatagacaatccacagtttgagggttacaagtttgac
ccgaatggagaatatgtacgaaggtggcttcctgaacttgctcgactgccaactgaatgg
atacaccacccttggaatgcaccggagtctgtactccaagctgctggcattgagcttgga
tccaattatcctctccccattgtgagtatagatgcagcaaaagctaggttgcaagaagca
cttactgatatgtggcagcaagaagcagcttcaagagctgcaattgagaatggaactgag
gaaggtcttggagactcatctgaagctgccccaattgcatttcctgaagatatacaaatg
gaggaaaaccatgaacctgctaggaataatcctcctaccacaattcggtgttatgaggat
cagatggtcccaagcatgactacttctttggtgagagttgaagaggaagagtcttcctca
gatcttcgaaattcagcagaaaatagcagagcagaagttccaagaaatgtgaatgtaaat
gtaaatcaagaacctagaagagatacattgaatcaaggggttctacctacagttcgcaac
aaccaccctttgccacaatttaatattacaggaggtctgggaaatgctgaagactccacg
gctgaatcttctagtaccagtagaagagagagggatggaggggtggttcccgtttggtct
ccttcaacttctagttactcggagcagttagtaggtgatgaaaatggcattggaacaagt
tcgtcgtacttgcagaggcatccacagtctcaccaaataatgaattgcaggcggctttct
caaactgggtaa
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