KEGG   Pistacia vera (pistachio): 116133555
Entry
116133555         CDS       T07386                                 
Name
(RefSeq) cyclin-T1-3-like isoform X1
  KO
K15188  cyclin T
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116133555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvy03021]
    116133555
Transcription machinery [BR:pvy03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     116133555
    Brd4/P-TEFb complex
     116133555
    7SK RNP complex
     116133555
SSDB
Motif
Pfam: Cyclin_N CycT2-like_C Cyclin_C TFIIB
Other DBs
NCBI-GeneID: 116133555
NCBI-ProteinID: XP_031275103
LinkDB
Position
Unknown
AA seq 626 aa
MASLLSGDPSHRGFYEGESSKLSQDKPEEGGRWYFSRKEIEGNSPSRRDGIDWKKETYLR
KSYCTFLQDLGMRLKVPQITIATAIIFCHRFFLRQSHARNDRRTIATVCMFLAGKVEETP
RPLKDVILVSYEIIHKKDKDPDAIHRIKQKEIYEQQKELILLGERVVLSTLGFDLNVLHP
YKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHVAAGAIFLAAKFLKVKLP
SDGERVWWQEFEVTPRQLEEVSNQMLELYEQNRLPTSQCGEVEVSAAAGSTQRASSRTLS
SSEEYPTTISYSQASCTTSRTLKPASTKPVSEHSLADNHCGSSRITQNQSNDWGHAEMEN
TIDDSAYGEFKDDLHPEPEKFSYQNKGEAQSTLRFGSDALGKEDQERTVVRNETRDVADI
KDKHSSRKLEHRGGLVSQSPQEAIKKIDKDKVKAALEKRRNSRVVTTRKTDLMDEDDLIE
RELENGVELAAENEKNKRDRRQSWSRSSDRQEYENSHFDKHQEDAGDSHGQMRGQSSRRL
DFGYAEDGEVSVPRNLSRGSHSPKSSSRKRKVGSSPDRSSEGKLRHSYGSGSNHYNHQDY
VEDRNRMGRLGYMERDQKRHVPENLV
NT seq 1881 nt   +upstreamnt  +downstreamnt
atggctagtttgttgtccggtgatccctcacaccgtggattttatgaaggtgagtcatcc
aaactttctcaggacaaaccagaagaaggtggccgttggtacttctctaggaaagaaatt
gaagggaattctccatctagacgagatggaattgattggaaaaaggagacttatcttcgc
aagtcatactgcacatttctgcaagacttgggcatgagacttaaagtacctcagataaca
attgctacagcaataatattctgccatcggttcttccttcgtcaatcacatgcaaggaat
gacagaaggaccatagccacagtgtgtatgtttctggcagggaaggttgaggagactcca
cgtccactgaaagatgttattcttgtttcatatgaaattattcataaaaaggataaggat
cctgatgcaattcataggatcaagcaaaaggagatatacgaacaacagaaagaattaatt
ttacttggggaaagggttgtactgtcaacccttggatttgatctaaatgtactccatcca
tacaaaccccttgttgaggcaataaagaaattcaaggttgctcagaatgcccttgctcaa
gttgcatggaactttgtcaatgatggactgcgtacctctctgtgcttacagtttaagccc
caccatgttgctgcgggggctatttttcttgctgcaaagttcctcaaagtaaagcttcca
tcagatggtgagagggtgtggtggcaagagtttgaagtcacccctcgccaattggaagag
gttagcaaccaaatgttggaactctatgaacaaaaccgattgccaacttcccagtgtggt
gaagttgaagtaagtgctgcagcggggagtactcagcgggcatcatcaagaactttatct
agcagtgaagaatatccaacaactattagttattctcaggctagttgtacaacttcaaga
accttaaagcctgcatcaactaagccagtgtctgaacattcattagctgataatcattgt
ggatcttccagaatcacccaaaatcagagtaatgactggggacatgcagagatggaaaat
actattgatgacagtgcatacggtgaatttaaagatgatctacaccctgaacccgagaaa
ttttcttaccagaacaagggagaagcacaaagcacattgaggtttgggtcagatgctctt
ggtaaagaagatcaagagaggactgttgtgaggaatgaaacaagagatgttgcggacata
aaggacaagcattctagccgaaaattggaacatagaggaggtttagttagccagtcaccc
caggaagctatcaagaagattgacaaagacaaggtaaaggcagccctagagaaacgaagg
aactcccgtgtagtcacgactcggaaaactgatttgatggatgaggatgatctgattgag
cgagaactggaaaatggagttgaattagctgcagagaatgagaaaaacaagcgcgaccgg
aggcagagctggtctagatcctcagacagacaggaatatgagaactcacatttcgataaa
catcaagaggatgctggagacagccacggacaaatgagaggacagtcatcacgcagatta
gatttcggttatgctgaagatggggaggtctcagtgcctcgcaaccttagccggggttct
cattcacccaagtcaagcagccgcaagcggaaggttggaagctctcctgatagatcatca
gagggaaagttgcgtcacagttatggttctgggtccaatcattataatcatcaagattat
gttgaagatcggaaccggatgggccggcttggttatatggagagagatcagaaaaggcac
gtgccagaaaatcttgtctga

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