Pistacia vera (pistachio): 116133645
Help
Entry
116133645 CDS
T07386
Name
(RefSeq) RNA polymerase sigma factor sigC-like
KO
K03093
RNA polymerase sigma-I factor
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvy03021
]
116133645
Transcription machinery [BR:
pvy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
116133645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
E_Pc_C
Atypical_Card
Motif
Other DBs
NCBI-GeneID:
116133645
NCBI-ProteinID:
XP_031275189
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MGFRLNLKWVSPFQSNCFTTSSCRLSSASVRGREGSLNSVRLSFLSIISEEASSYSHDPA
KAYARSSAGPQTLENDYSETDKISQKSASQRGQNMCSTSDYGLLMENLYVLESTFADSDV
LRLEREILQQLGRLGALKLFNTCLSRTPKTSSIFNLSDVPAEQTMNGTVENHKGKIIIHS
KRKEKRKSRTERVSEKSSKTSSVSLPSKATCGNLEQRTVSFTKRKSNSRSRRSMIARNEA
EMSKGVKVVANLERIRTTLEEEAGQVLSLSCWAEAAGVSEKVLRQYLCFGWYCRDELLQG
TRSLVLYVARNYRGLGIPLADLVQAGNFGVLQGAERFDHTRGYRFSTYVQYWIRKSISRM
VAQHARGIKIPYTLSRSINKIQKARKALNSSHGKYPEDIEIAKFTGLSLAEIRSASECLR
VVGSIDQKIGDWLNAKYLEFMPDLSINCPEEIVTRQHMKKDIYNLLKNLDSRERQVLMLR
YGLKDHCPRSLEEIGKLFHVSKEWIRRIEKKAMTKLSDEETRRNLSHYLDL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcagactgaatctcaagtgggtttccccctttcagtctaattgtttcacaact
tcctcttgcaggctctcttctgcctctgttcgaggcagggagggtagcttgaactcagta
aggttgtctttcctgtctataatttctgaggaggcttctagctattctcatgatcctgca
aaagcgtatgctcgttcatctgctggtccacagaccttagaaaatgattactcagaaaca
gataaaatttcgcagaaatctgcgtcacaaagaggccaaaatatgtgcagcacatcggat
tatggtttactaatggaaaatctttatgttttagagtcaacatttgctgattcggatgtg
ttgaggttggaaagagagattctgcaacaattaggaagacttggagctcttaaattattc
aatacttgtctatctaggacaccaaaaacctcaagtatttttaatttgtctgatgttcct
gctgagcagacaatgaatggcacagtggagaatcacaaggggaagataattattcactct
aaaaggaaggaaaagagaaaatcaaggacagaaagagtatcagaaaagtctagtaaaact
tcttcagtgtcattgccttcaaaagccacctgtggaaatttagagcagcgcactgtttct
ttcacgaaaagaaaatcaaactctagaagcagaagatcaatgattgctagaaatgaggca
gagatgtcaaagggggttaaggtggttgcaaacttggaaagaatcagaacaactttggaa
gaagaagcagggcaagttctcagtttgagttgctgggctgaagcagctggagtcagtgag
aaggtgctgcggcagtatctgtgttttggttggtattgcagagatgagctgctacagggt
actcgctccttagtgttatacgttgcaagaaattacaggggtctaggaatcccattagca
gacttagttcaggccggaaattttggtgttctacaaggtgcggagaggtttgaccataca
aggggatacagattctcaacctatgttcagtactggataaggaaatcaatttcaaggatg
gtggcacagcatgctaggggaatcaaaattccttacacactaagcaggtcaataaataaa
atacagaaagctcgaaaagccttgaacagcagccatggaaaatatccagaagatattgag
attgccaagttcacaggtctttctttggctgaaatcagatcagctagcgaatgcctgcga
gttgtggggtcaattgatcagaaaataggggattggctgaatgcaaaatatttggaattt
atgcctgatttgtctataaactgtcctgaagaaattgtgacaaggcaacacatgaagaaa
gacatttataatcttttaaagaatttagattcaagggagagacaagtattgatgctaaga
tatgggcttaaggatcattgccctaggtcgcttgaggagatcgggaagcttttccacgtg
agcaaagagtggataaggagaatagagaagaaagctatgacaaaattatcggatgaagaa
acccgcagaaatttaagccattatttggatttgtag
DBGET
integrated database retrieval system
