KEGG   Pistacia vera (pistachio): 116134169
Entry
116134169         CDS       T07386                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116134169
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvy03041]
    116134169
Spliceosome [BR:pvy03041]
 Complex A
  U2 snRNP components
   U2 related factors
    116134169
 Complex B
    116134169
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus HATPase_c zf-CCCH_4
Other DBs
NCBI-GeneID: 116134169
NCBI-ProteinID: XP_031275709
LinkDB
Position
Unknown
AA seq 321 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRVHTKPSISPTLLLSNMYQRPDMITP
GVDANGNPIDPRKIQQHFEDFYEDLFEELSKYGDIESLNVCDNLADHMVGNVYVQFREEE
YAARALKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRIGREL
RRELFGRYRRRPSHSRSPYRHRSHEERSHGGHGSSRRYDDRDRYHESRSRRHRSTSPSHR
RGRSRSPGGRRNCSPVREGSEERRAKIEQWNREREMQENASKENTGNNKESENINDGYMQ
NGNQHCGYQQQPPRNQGDYVY
NT seq 966 nt   +upstreamnt  +downstreamnt
atggccgaacacttggcttcaatttttggcacagagaaagacagggttaactgtccattt
tacttcaagatcggcgcctgtagacatggggaccgctgctcgcgcgtccacaccaaacct
agcattagccctactctcttgctttcaaacatgtatcaacgccctgatatgatcacacct
ggcgtcgacgcaaatggcaatcccattgacccccgcaagatccagcagcacttcgaggat
ttttatgaagatctctttgaggaattgagcaaatatggtgacattgagagcttgaatgtc
tgtgacaacctagctgaccacatggttggtaatgtgtatgttcaatttagggaggaagaa
tatgctgcaagagcactaaaaaatctgactgggaggttttatgctggacgtcccattatt
gtggacttctcccctgtgacggatttccgtgaagccacctgtaggcaatatgaggagaac
acctgcaaccgtggtggatactgcaatttcatgcacctgaaaaggattggcagggagttg
aggcgtgaactatttgggagatacaggcgaaggcctagccacagcaggagcccctatagg
catcgcagccatgaagagcgttcacatggtgggcatggttctagcagaaggtacgatgac
agggatcgctatcatgaaagtaggagcaggaggcataggagcacaagccctagccatagg
agagggagaagcagaagtcctggtggaagacggaattgtagtcctgtcagggaaggcagt
gaggagagacgagccaaaattgagcagtggaacagggaaagagaaatgcaagaaaatgct
agtaaagaaaataccggcaacaacaaagaatccgaaaatatcaatgatggttatatgcaa
aatggtaaccaacactgtggatatcagcagcagcctccgcggaatcaaggagactatgta
tactga

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